Protein–RNA interactions for Protein: Q9Y4K3

TRAF6, TNF receptor-associated factor 6, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF6Q9Y4K3 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.27■□□□□ 0.84
TRAF6Q9Y4K3 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRAF6Q9Y4K3 AC005224.4-201ENST00000583262 1652 ntBASIC20.27■□□□□ 0.84
TRAF6Q9Y4K3 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
TRAF6Q9Y4K3 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRAF6Q9Y4K3 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.27■□□□□ 0.84
TRAF6Q9Y4K3 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.27■□□□□ 0.84
TRAF6Q9Y4K3 AC131212.1-201ENST00000613771 668 ntBASIC20.27■□□□□ 0.84
TRAF6Q9Y4K3 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
TRAF6Q9Y4K3 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRAF6Q9Y4K3 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRAF6Q9Y4K3 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRAF6Q9Y4K3 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
TRAF6Q9Y4K3 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.27■□□□□ 0.83
TRAF6Q9Y4K3 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
TRAF6Q9Y4K3 AC135279.3-201ENST00000610945 1311 ntBASIC20.27■□□□□ 0.83
TRAF6Q9Y4K3 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TRAF6Q9Y4K3 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAF6Q9Y4K3 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.26■□□□□ 0.83
TRAF6Q9Y4K3 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAF6Q9Y4K3 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRAF6Q9Y4K3 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAF6Q9Y4K3 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.26■□□□□ 0.83
TRAF6Q9Y4K3 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.26■□□□□ 0.83
TRAF6Q9Y4K3 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.26■□□□□ 0.83
TRAF6Q9Y4K3 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.26■□□□□ 0.83
TRAF6Q9Y4K3 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
TRAF6Q9Y4K3 AC008764.7-201ENST00000593779 1081 ntBASIC20.26■□□□□ 0.83
TRAF6Q9Y4K3 AC105233.4-201ENST00000642045 216 ntBASIC20.26■□□□□ 0.83
TRAF6Q9Y4K3 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAF6Q9Y4K3 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAF6Q9Y4K3 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRAF6Q9Y4K3 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAF6Q9Y4K3 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRAF6Q9Y4K3 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
TRAF6Q9Y4K3 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRAF6Q9Y4K3 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRAF6Q9Y4K3 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRAF6Q9Y4K3 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.25■□□□□ 0.83
TRAF6Q9Y4K3 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRAF6Q9Y4K3 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRAF6Q9Y4K3 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
TRAF6Q9Y4K3 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.25■□□□□ 0.83
TRAF6Q9Y4K3 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRAF6Q9Y4K3 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRAF6Q9Y4K3 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.25■□□□□ 0.83
TRAF6Q9Y4K3 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.25■□□□□ 0.83
TRAF6Q9Y4K3 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
TRAF6Q9Y4K3 AC007225.1-201ENST00000566331 1836 ntBASIC20.25■□□□□ 0.83
TRAF6Q9Y4K3 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
TRAF6Q9Y4K3 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRAF6Q9Y4K3 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
TRAF6Q9Y4K3 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRAF6Q9Y4K3 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRAF6Q9Y4K3 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRAF6Q9Y4K3 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRAF6Q9Y4K3 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
TRAF6Q9Y4K3 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRAF6Q9Y4K3 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
TRAF6Q9Y4K3 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.24■□□□□ 0.83
TRAF6Q9Y4K3 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.24■□□□□ 0.83
TRAF6Q9Y4K3 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.24■□□□□ 0.83
TRAF6Q9Y4K3 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.24■□□□□ 0.83
TRAF6Q9Y4K3 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRAF6Q9Y4K3 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRAF6Q9Y4K3 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
TRAF6Q9Y4K3 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.24■□□□□ 0.83
TRAF6Q9Y4K3 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRAF6Q9Y4K3 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRAF6Q9Y4K3 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.24■□□□□ 0.83
TRAF6Q9Y4K3 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRAF6Q9Y4K3 AC027702.1-201ENST00000563810 1770 ntBASIC20.23■□□□□ 0.83
TRAF6Q9Y4K3 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.23■□□□□ 0.83
TRAF6Q9Y4K3 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TRAF6Q9Y4K3 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRAF6Q9Y4K3 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRAF6Q9Y4K3 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRAF6Q9Y4K3 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.23■□□□□ 0.83
TRAF6Q9Y4K3 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRAF6Q9Y4K3 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRAF6Q9Y4K3 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.23■□□□□ 0.83
TRAF6Q9Y4K3 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.23■□□□□ 0.83
TRAF6Q9Y4K3 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.23■□□□□ 0.83
TRAF6Q9Y4K3 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRAF6Q9Y4K3 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
TRAF6Q9Y4K3 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRAF6Q9Y4K3 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRAF6Q9Y4K3 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.23■□□□□ 0.83
TRAF6Q9Y4K3 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TRAF6Q9Y4K3 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
TRAF6Q9Y4K3 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
TRAF6Q9Y4K3 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRAF6Q9Y4K3 BX005040.4-201ENST00000637145 1518 ntBASIC20.22■□□□□ 0.83
TRAF6Q9Y4K3 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRAF6Q9Y4K3 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRAF6Q9Y4K3 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
TRAF6Q9Y4K3 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRAF6Q9Y4K3 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.22■□□□□ 0.83
TRAF6Q9Y4K3 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
TRAF6Q9Y4K3 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms