Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 OR2A1-AS1-204ENST00000470435 602 ntBASIC14.49□□□□□ -0.09
UBE2D4Q9Y2X8 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC14.49□□□□□ -0.09
UBE2D4Q9Y2X8 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
UBE2D4Q9Y2X8 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
UBE2D4Q9Y2X8 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
UBE2D4Q9Y2X8 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
UBE2D4Q9Y2X8 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC14.49□□□□□ -0.09
UBE2D4Q9Y2X8 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
UBE2D4Q9Y2X8 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC14.49□□□□□ -0.09
UBE2D4Q9Y2X8 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC14.49□□□□□ -0.09
UBE2D4Q9Y2X8 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
UBE2D4Q9Y2X8 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC14.49□□□□□ -0.09
UBE2D4Q9Y2X8 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC14.48□□□□□ -0.09
UBE2D4Q9Y2X8 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
UBE2D4Q9Y2X8 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
UBE2D4Q9Y2X8 SYT6-210ENST00000641643 1587 ntBASIC14.48□□□□□ -0.09
UBE2D4Q9Y2X8 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC14.48□□□□□ -0.09
UBE2D4Q9Y2X8 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
UBE2D4Q9Y2X8 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
UBE2D4Q9Y2X8 SERBP1P1-201ENST00000396021 1160 ntBASIC14.48□□□□□ -0.09
UBE2D4Q9Y2X8 SLC47A1P1-202ENST00000449666 945 ntBASIC14.48□□□□□ -0.09
UBE2D4Q9Y2X8 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
UBE2D4Q9Y2X8 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC14.48□□□□□ -0.09
UBE2D4Q9Y2X8 AC136469.2-201ENST00000623944 1028 ntBASIC14.48□□□□□ -0.09
UBE2D4Q9Y2X8 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
UBE2D4Q9Y2X8 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC14.48□□□□□ -0.09
UBE2D4Q9Y2X8 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
UBE2D4Q9Y2X8 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
UBE2D4Q9Y2X8 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
UBE2D4Q9Y2X8 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
UBE2D4Q9Y2X8 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
UBE2D4Q9Y2X8 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
UBE2D4Q9Y2X8 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC14.47□□□□□ -0.09
UBE2D4Q9Y2X8 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
UBE2D4Q9Y2X8 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC14.47□□□□□ -0.09
UBE2D4Q9Y2X8 ME2-218ENST00000640965 2476 ntTSL 5 BASIC14.47□□□□□ -0.09
UBE2D4Q9Y2X8 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
UBE2D4Q9Y2X8 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC14.47□□□□□ -0.09
UBE2D4Q9Y2X8 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
UBE2D4Q9Y2X8 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
UBE2D4Q9Y2X8 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC14.47□□□□□ -0.09
UBE2D4Q9Y2X8 DUX4L19-201ENST00000557448 1267 ntBASIC14.47□□□□□ -0.09
UBE2D4Q9Y2X8 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC14.47□□□□□ -0.09
UBE2D4Q9Y2X8 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
UBE2D4Q9Y2X8 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
UBE2D4Q9Y2X8 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC14.47□□□□□ -0.09
UBE2D4Q9Y2X8 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
UBE2D4Q9Y2X8 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
UBE2D4Q9Y2X8 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC14.46□□□□□ -0.09
UBE2D4Q9Y2X8 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC14.46□□□□□ -0.09
UBE2D4Q9Y2X8 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC14.46□□□□□ -0.09
UBE2D4Q9Y2X8 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
UBE2D4Q9Y2X8 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC14.46□□□□□ -0.09
UBE2D4Q9Y2X8 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
UBE2D4Q9Y2X8 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
UBE2D4Q9Y2X8 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
UBE2D4Q9Y2X8 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
UBE2D4Q9Y2X8 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
UBE2D4Q9Y2X8 PCDHAC2-203ENST00000615316 3011 ntBASIC14.46□□□□□ -0.09
UBE2D4Q9Y2X8 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
UBE2D4Q9Y2X8 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
UBE2D4Q9Y2X8 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
UBE2D4Q9Y2X8 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
UBE2D4Q9Y2X8 QDPR-206ENST00000508623 601 ntTSL 3 BASIC14.46□□□□□ -0.09
UBE2D4Q9Y2X8 AL512631.2-201ENST00000604634 923 ntBASIC14.46□□□□□ -0.09
UBE2D4Q9Y2X8 AC011298.3-201ENST00000615796 283 ntBASIC14.46□□□□□ -0.09
UBE2D4Q9Y2X8 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
UBE2D4Q9Y2X8 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC14.46□□□□□ -0.09
UBE2D4Q9Y2X8 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC14.46□□□□□ -0.09
UBE2D4Q9Y2X8 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
UBE2D4Q9Y2X8 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC14.46□□□□□ -0.09
UBE2D4Q9Y2X8 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
UBE2D4Q9Y2X8 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC14.46□□□□□ -0.09
UBE2D4Q9Y2X8 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
UBE2D4Q9Y2X8 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
UBE2D4Q9Y2X8 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
UBE2D4Q9Y2X8 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
UBE2D4Q9Y2X8 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC14.46□□□□□ -0.1
UBE2D4Q9Y2X8 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
UBE2D4Q9Y2X8 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
UBE2D4Q9Y2X8 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC14.46□□□□□ -0.1
UBE2D4Q9Y2X8 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
UBE2D4Q9Y2X8 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC14.46□□□□□ -0.1
UBE2D4Q9Y2X8 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UBE2D4Q9Y2X8 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UBE2D4Q9Y2X8 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UBE2D4Q9Y2X8 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC14.45□□□□□ -0.1
UBE2D4Q9Y2X8 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
UBE2D4Q9Y2X8 AFG3L1P-217ENST00000557444 2447 ntBASIC14.45□□□□□ -0.1
UBE2D4Q9Y2X8 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
UBE2D4Q9Y2X8 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC14.45□□□□□ -0.1
UBE2D4Q9Y2X8 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UBE2D4Q9Y2X8 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
UBE2D4Q9Y2X8 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UBE2D4Q9Y2X8 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
UBE2D4Q9Y2X8 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC14.45□□□□□ -0.1
UBE2D4Q9Y2X8 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
UBE2D4Q9Y2X8 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
UBE2D4Q9Y2X8 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
UBE2D4Q9Y2X8 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms