Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 CBFB-203ENST00000561924 584 ntTSL 5 BASIC31.27■■■□□ 2.6
SHANK2Q9UPX8 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC31.27■■■□□ 2.6
SHANK2Q9UPX8 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
SHANK2Q9UPX8 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC31.27■■■□□ 2.6
SHANK2Q9UPX8 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
SHANK2Q9UPX8 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
SHANK2Q9UPX8 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC31.27■■■□□ 2.6
SHANK2Q9UPX8 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC31.27■■■□□ 2.6
SHANK2Q9UPX8 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
SHANK2Q9UPX8 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC31.27■■■□□ 2.6
SHANK2Q9UPX8 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
SHANK2Q9UPX8 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
SHANK2Q9UPX8 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC31.27■■■□□ 2.6
SHANK2Q9UPX8 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC31.26■■■□□ 2.6
SHANK2Q9UPX8 AC242852.2-201ENST00000615738 1807 ntBASIC31.26■■■□□ 2.6
SHANK2Q9UPX8 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
SHANK2Q9UPX8 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
SHANK2Q9UPX8 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
SHANK2Q9UPX8 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
SHANK2Q9UPX8 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
SHANK2Q9UPX8 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
SHANK2Q9UPX8 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC31.26■■■□□ 2.59
SHANK2Q9UPX8 AC128676.1-201ENST00000454392 318 ntBASIC31.26■■■□□ 2.59
SHANK2Q9UPX8 MMD2-204ENST00000612910 778 ntTSL 5 BASIC31.26■■■□□ 2.59
SHANK2Q9UPX8 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
SHANK2Q9UPX8 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC31.26■■■□□ 2.59
SHANK2Q9UPX8 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC31.25■■■□□ 2.59
SHANK2Q9UPX8 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
SHANK2Q9UPX8 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
SHANK2Q9UPX8 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
SHANK2Q9UPX8 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
SHANK2Q9UPX8 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
SHANK2Q9UPX8 RPS2P4-201ENST00000476944 856 ntBASIC31.25■■■□□ 2.59
SHANK2Q9UPX8 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC31.25■■■□□ 2.59
SHANK2Q9UPX8 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
SHANK2Q9UPX8 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC31.25■■■□□ 2.59
SHANK2Q9UPX8 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC31.25■■■□□ 2.59
SHANK2Q9UPX8 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC31.24■■■□□ 2.59
SHANK2Q9UPX8 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
SHANK2Q9UPX8 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC31.24■■■□□ 2.59
SHANK2Q9UPX8 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC31.24■■■□□ 2.59
SHANK2Q9UPX8 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
SHANK2Q9UPX8 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC31.24■■■□□ 2.59
SHANK2Q9UPX8 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
SHANK2Q9UPX8 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC31.24■■■□□ 2.59
SHANK2Q9UPX8 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
SHANK2Q9UPX8 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC31.24■■■□□ 2.59
SHANK2Q9UPX8 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
SHANK2Q9UPX8 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC31.24■■■□□ 2.59
SHANK2Q9UPX8 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC31.24■■■□□ 2.59
SHANK2Q9UPX8 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
SHANK2Q9UPX8 GCK-205ENST00000437084 1385 ntTSL 5 BASIC31.24■■■□□ 2.59
SHANK2Q9UPX8 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC31.23■■■□□ 2.59
SHANK2Q9UPX8 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
SHANK2Q9UPX8 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC31.23■■■□□ 2.59
SHANK2Q9UPX8 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC31.23■■■□□ 2.59
SHANK2Q9UPX8 AC073648.6-201ENST00000641589 218 ntBASIC31.23■■■□□ 2.59
SHANK2Q9UPX8 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC31.23■■■□□ 2.59
SHANK2Q9UPX8 CASK-201ENST00000378154 2494 ntTSL 5 BASIC31.23■■■□□ 2.59
SHANK2Q9UPX8 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC31.23■■■□□ 2.59
SHANK2Q9UPX8 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
SHANK2Q9UPX8 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
SHANK2Q9UPX8 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
SHANK2Q9UPX8 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC31.23■■■□□ 2.59
SHANK2Q9UPX8 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC31.22■■■□□ 2.59
SHANK2Q9UPX8 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC31.22■■■□□ 2.59
SHANK2Q9UPX8 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC31.22■■■□□ 2.59
SHANK2Q9UPX8 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
SHANK2Q9UPX8 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
SHANK2Q9UPX8 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC31.22■■■□□ 2.59
SHANK2Q9UPX8 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC31.22■■■□□ 2.59
SHANK2Q9UPX8 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC31.22■■■□□ 2.59
SHANK2Q9UPX8 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
SHANK2Q9UPX8 PNMA6B-201ENST00000538162 1200 ntBASIC31.22■■■□□ 2.59
SHANK2Q9UPX8 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
SHANK2Q9UPX8 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC31.22■■■□□ 2.59
SHANK2Q9UPX8 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC31.22■■■□□ 2.59
SHANK2Q9UPX8 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC31.22■■■□□ 2.59
SHANK2Q9UPX8 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
SHANK2Q9UPX8 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC31.22■■■□□ 2.59
SHANK2Q9UPX8 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
SHANK2Q9UPX8 AC087633.2-202ENST00000565166 1439 ntBASIC31.22■■■□□ 2.59
SHANK2Q9UPX8 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC31.21■■■□□ 2.59
SHANK2Q9UPX8 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC31.21■■■□□ 2.59
SHANK2Q9UPX8 KLF2-202ENST00000592003 564 ntTSL 3 BASIC31.21■■■□□ 2.59
SHANK2Q9UPX8 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC31.21■■■□□ 2.59
SHANK2Q9UPX8 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC31.21■■■□□ 2.59
SHANK2Q9UPX8 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC31.21■■■□□ 2.59
SHANK2Q9UPX8 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
SHANK2Q9UPX8 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC31.21■■■□□ 2.59
SHANK2Q9UPX8 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC31.2■■■□□ 2.59
SHANK2Q9UPX8 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
SHANK2Q9UPX8 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC31.2■■■□□ 2.59
SHANK2Q9UPX8 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC31.2■■■□□ 2.59
SHANK2Q9UPX8 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
SHANK2Q9UPX8 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
SHANK2Q9UPX8 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC31.2■■■□□ 2.58
SHANK2Q9UPX8 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
SHANK2Q9UPX8 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
SHANK2Q9UPX8 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC31.19■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms