Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 AC011767.1-201ENST00000617410 1153 ntBASIC19.72■□□□□ 0.75
PRDM9Q9NQV7 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PRDM9Q9NQV7 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PRDM9Q9NQV7 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PRDM9Q9NQV7 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.72■□□□□ 0.75
PRDM9Q9NQV7 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PRDM9Q9NQV7 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.72■□□□□ 0.75
PRDM9Q9NQV7 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PRDM9Q9NQV7 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.71■□□□□ 0.75
PRDM9Q9NQV7 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
PRDM9Q9NQV7 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PRDM9Q9NQV7 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PRDM9Q9NQV7 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PRDM9Q9NQV7 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
PRDM9Q9NQV7 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PRDM9Q9NQV7 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PRDM9Q9NQV7 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.71■□□□□ 0.75
PRDM9Q9NQV7 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PRDM9Q9NQV7 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PRDM9Q9NQV7 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PRDM9Q9NQV7 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
PRDM9Q9NQV7 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PRDM9Q9NQV7 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.7■□□□□ 0.74
PRDM9Q9NQV7 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PRDM9Q9NQV7 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PRDM9Q9NQV7 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PRDM9Q9NQV7 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PRDM9Q9NQV7 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.7■□□□□ 0.74
PRDM9Q9NQV7 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.7■□□□□ 0.74
PRDM9Q9NQV7 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PRDM9Q9NQV7 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.7■□□□□ 0.74
PRDM9Q9NQV7 MFSD11-216ENST00000590393 1141 ntBASIC19.7■□□□□ 0.74
PRDM9Q9NQV7 AC080038.1-201ENST00000611274 1154 ntBASIC19.7■□□□□ 0.74
PRDM9Q9NQV7 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PRDM9Q9NQV7 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PRDM9Q9NQV7 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PRDM9Q9NQV7 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PRDM9Q9NQV7 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PRDM9Q9NQV7 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
PRDM9Q9NQV7 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
PRDM9Q9NQV7 AL024507.2-201ENST00000606070 2574 ntBASIC19.69■□□□□ 0.74
PRDM9Q9NQV7 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PRDM9Q9NQV7 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PRDM9Q9NQV7 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.69■□□□□ 0.74
PRDM9Q9NQV7 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.69■□□□□ 0.74
PRDM9Q9NQV7 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.69■□□□□ 0.74
PRDM9Q9NQV7 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.69■□□□□ 0.74
PRDM9Q9NQV7 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PRDM9Q9NQV7 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PRDM9Q9NQV7 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PRDM9Q9NQV7 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PRDM9Q9NQV7 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PRDM9Q9NQV7 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.69■□□□□ 0.74
PRDM9Q9NQV7 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PRDM9Q9NQV7 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRDM9Q9NQV7 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRDM9Q9NQV7 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRDM9Q9NQV7 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRDM9Q9NQV7 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRDM9Q9NQV7 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
PRDM9Q9NQV7 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.68■□□□□ 0.74
PRDM9Q9NQV7 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.68■□□□□ 0.74
PRDM9Q9NQV7 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
PRDM9Q9NQV7 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRDM9Q9NQV7 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
PRDM9Q9NQV7 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.68■□□□□ 0.74
PRDM9Q9NQV7 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
PRDM9Q9NQV7 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
PRDM9Q9NQV7 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
PRDM9Q9NQV7 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRDM9Q9NQV7 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PRDM9Q9NQV7 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.67■□□□□ 0.74
PRDM9Q9NQV7 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.67■□□□□ 0.74
PRDM9Q9NQV7 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PRDM9Q9NQV7 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PRDM9Q9NQV7 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PRDM9Q9NQV7 AC007375.3-201ENST00000600936 2314 ntBASIC19.67■□□□□ 0.74
PRDM9Q9NQV7 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.67■□□□□ 0.74
PRDM9Q9NQV7 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
PRDM9Q9NQV7 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PRDM9Q9NQV7 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.67■□□□□ 0.74
PRDM9Q9NQV7 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.67■□□□□ 0.74
PRDM9Q9NQV7 AC010536.3-201ENST00000620306 533 ntBASIC19.67■□□□□ 0.74
PRDM9Q9NQV7 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.67■□□□□ 0.74
PRDM9Q9NQV7 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PRDM9Q9NQV7 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PRDM9Q9NQV7 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PRDM9Q9NQV7 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
PRDM9Q9NQV7 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PRDM9Q9NQV7 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
PRDM9Q9NQV7 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PRDM9Q9NQV7 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PRDM9Q9NQV7 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
PRDM9Q9NQV7 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
PRDM9Q9NQV7 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PRDM9Q9NQV7 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PRDM9Q9NQV7 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.66■□□□□ 0.74
PRDM9Q9NQV7 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.66■□□□□ 0.74
PRDM9Q9NQV7 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
PRDM9Q9NQV7 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms