Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 IPPK-202ENST00000375522 882 ntTSL 3 BASIC21.13■□□□□ 0.97
LRFN3Q9BTN0 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
LRFN3Q9BTN0 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC21.13■□□□□ 0.97
LRFN3Q9BTN0 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC21.13■□□□□ 0.97
LRFN3Q9BTN0 AC079089.2-201ENST00000531211 1277 ntBASIC21.13■□□□□ 0.97
LRFN3Q9BTN0 AC120498.8-201ENST00000614275 531 ntBASIC21.13■□□□□ 0.97
LRFN3Q9BTN0 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
LRFN3Q9BTN0 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.13■□□□□ 0.97
LRFN3Q9BTN0 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
LRFN3Q9BTN0 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.13■□□□□ 0.97
LRFN3Q9BTN0 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LRFN3Q9BTN0 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LRFN3Q9BTN0 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
LRFN3Q9BTN0 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LRFN3Q9BTN0 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LRFN3Q9BTN0 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LRFN3Q9BTN0 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC21.12■□□□□ 0.97
LRFN3Q9BTN0 NAPSB-206ENST00000562112 1266 ntBASIC21.12■□□□□ 0.97
LRFN3Q9BTN0 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC21.12■□□□□ 0.97
LRFN3Q9BTN0 AP000525.1-201ENST00000608286 694 ntBASIC21.12■□□□□ 0.97
LRFN3Q9BTN0 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LRFN3Q9BTN0 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LRFN3Q9BTN0 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LRFN3Q9BTN0 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LRFN3Q9BTN0 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
LRFN3Q9BTN0 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.11■□□□□ 0.97
LRFN3Q9BTN0 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
LRFN3Q9BTN0 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LRFN3Q9BTN0 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LRFN3Q9BTN0 GUK1-204ENST00000366721 689 ntTSL 3 BASIC21.11■□□□□ 0.97
LRFN3Q9BTN0 MIR1238-201ENST00000408483 83 ntBASIC21.11■□□□□ 0.97
LRFN3Q9BTN0 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC21.11■□□□□ 0.97
LRFN3Q9BTN0 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC21.11■□□□□ 0.97
LRFN3Q9BTN0 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC21.11■□□□□ 0.97
LRFN3Q9BTN0 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC21.11■□□□□ 0.97
LRFN3Q9BTN0 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC21.11■□□□□ 0.97
LRFN3Q9BTN0 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC21.11■□□□□ 0.97
LRFN3Q9BTN0 AC105020.6-201ENST00000621523 1217 ntBASIC21.11■□□□□ 0.97
LRFN3Q9BTN0 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
LRFN3Q9BTN0 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LRFN3Q9BTN0 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
LRFN3Q9BTN0 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LRFN3Q9BTN0 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
LRFN3Q9BTN0 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.11■□□□□ 0.97
LRFN3Q9BTN0 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LRFN3Q9BTN0 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.11■□□□□ 0.97
LRFN3Q9BTN0 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LRFN3Q9BTN0 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRFN3Q9BTN0 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
LRFN3Q9BTN0 AP006587.3-201ENST00000525742 1516 ntBASIC21.1■□□□□ 0.97
LRFN3Q9BTN0 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRFN3Q9BTN0 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC21.1■□□□□ 0.97
LRFN3Q9BTN0 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRFN3Q9BTN0 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRFN3Q9BTN0 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRFN3Q9BTN0 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRFN3Q9BTN0 UNC93B2-201ENST00000285383 730 ntBASIC21.1■□□□□ 0.97
LRFN3Q9BTN0 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LRFN3Q9BTN0 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LRFN3Q9BTN0 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC21.1■□□□□ 0.97
LRFN3Q9BTN0 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
LRFN3Q9BTN0 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRFN3Q9BTN0 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRFN3Q9BTN0 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC21.1■□□□□ 0.97
LRFN3Q9BTN0 TMA16-209ENST00000513272 803 ntTSL 2 BASIC21.1■□□□□ 0.97
LRFN3Q9BTN0 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
LRFN3Q9BTN0 AF186192.3-201ENST00000583427 947 ntBASIC21.1■□□□□ 0.97
LRFN3Q9BTN0 RPS15-203ENST00000586096 570 ntTSL 2 BASIC21.1■□□□□ 0.97
LRFN3Q9BTN0 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LRFN3Q9BTN0 AL031963.3-201ENST00000606441 850 ntBASIC21.1■□□□□ 0.97
LRFN3Q9BTN0 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC21.1■□□□□ 0.97
LRFN3Q9BTN0 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC21.1■□□□□ 0.97
LRFN3Q9BTN0 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC21.1■□□□□ 0.97
LRFN3Q9BTN0 LINC00543-201ENST00000567234 1845 ntBASIC21.1■□□□□ 0.97
LRFN3Q9BTN0 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
LRFN3Q9BTN0 AC087633.2-202ENST00000565166 1439 ntBASIC21.1■□□□□ 0.97
LRFN3Q9BTN0 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRFN3Q9BTN0 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRFN3Q9BTN0 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LRFN3Q9BTN0 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LRFN3Q9BTN0 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
LRFN3Q9BTN0 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LRFN3Q9BTN0 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC21.09■□□□□ 0.97
LRFN3Q9BTN0 ISCU-203ENST00000431221 799 ntTSL 2 BASIC21.09■□□□□ 0.97
LRFN3Q9BTN0 CDV3P1-201ENST00000471403 739 ntBASIC21.09■□□□□ 0.97
LRFN3Q9BTN0 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.09■□□□□ 0.97
LRFN3Q9BTN0 AL034346.1-201ENST00000568244 1277 ntBASIC21.09■□□□□ 0.97
LRFN3Q9BTN0 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
LRFN3Q9BTN0 AC006011.2-201ENST00000621313 1158 ntBASIC21.09■□□□□ 0.97
LRFN3Q9BTN0 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.09■□□□□ 0.97
LRFN3Q9BTN0 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
LRFN3Q9BTN0 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LRFN3Q9BTN0 CYP2D8P-201ENST00000433633 1490 ntBASIC21.08■□□□□ 0.97
LRFN3Q9BTN0 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LRFN3Q9BTN0 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.97
LRFN3Q9BTN0 FAM197Y1-201ENST00000421178 764 ntBASIC21.08■□□□□ 0.97
LRFN3Q9BTN0 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC21.08■□□□□ 0.97
LRFN3Q9BTN0 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LRFN3Q9BTN0 AC009947.2-201ENST00000444014 672 ntBASIC21.08■□□□□ 0.97
LRFN3Q9BTN0 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms