Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCM2Q9BSQ5 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.53■□□□□ 0.88
CCM2Q9BSQ5 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.53■□□□□ 0.88
CCM2Q9BSQ5 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCM2Q9BSQ5 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCM2Q9BSQ5 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCM2Q9BSQ5 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.53■□□□□ 0.88
CCM2Q9BSQ5 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.53■□□□□ 0.88
CCM2Q9BSQ5 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCM2Q9BSQ5 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCM2Q9BSQ5 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCM2Q9BSQ5 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCM2Q9BSQ5 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCM2Q9BSQ5 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCM2Q9BSQ5 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCM2Q9BSQ5 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.52■□□□□ 0.88
CCM2Q9BSQ5 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCM2Q9BSQ5 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.52■□□□□ 0.88
CCM2Q9BSQ5 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.52■□□□□ 0.88
CCM2Q9BSQ5 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCM2Q9BSQ5 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
CCM2Q9BSQ5 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.52■□□□□ 0.88
CCM2Q9BSQ5 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CCM2Q9BSQ5 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.52■□□□□ 0.88
CCM2Q9BSQ5 AC011767.1-201ENST00000617410 1153 ntBASIC20.52■□□□□ 0.88
CCM2Q9BSQ5 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCM2Q9BSQ5 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCM2Q9BSQ5 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCM2Q9BSQ5 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CCM2Q9BSQ5 FEM1AP4-201ENST00000443167 1987 ntBASIC20.52■□□□□ 0.87
CCM2Q9BSQ5 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCM2Q9BSQ5 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
CCM2Q9BSQ5 AL024507.2-201ENST00000606070 2574 ntBASIC20.51■□□□□ 0.87
CCM2Q9BSQ5 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCM2Q9BSQ5 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCM2Q9BSQ5 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCM2Q9BSQ5 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.51■□□□□ 0.87
CCM2Q9BSQ5 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
CCM2Q9BSQ5 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.51■□□□□ 0.87
CCM2Q9BSQ5 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CCM2Q9BSQ5 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCM2Q9BSQ5 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCM2Q9BSQ5 AC245052.3-201ENST00000450182 901 ntBASIC20.51■□□□□ 0.87
CCM2Q9BSQ5 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.51■□□□□ 0.87
CCM2Q9BSQ5 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.51■□□□□ 0.87
CCM2Q9BSQ5 MFSD11-216ENST00000590393 1141 ntBASIC20.51■□□□□ 0.87
CCM2Q9BSQ5 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
CCM2Q9BSQ5 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.51■□□□□ 0.87
CCM2Q9BSQ5 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCM2Q9BSQ5 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCM2Q9BSQ5 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.51■□□□□ 0.87
CCM2Q9BSQ5 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
CCM2Q9BSQ5 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCM2Q9BSQ5 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
CCM2Q9BSQ5 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCM2Q9BSQ5 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCM2Q9BSQ5 PKD1P6-201ENST00000343738 4769 ntBASIC20.5■□□□□ 0.87
CCM2Q9BSQ5 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCM2Q9BSQ5 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCM2Q9BSQ5 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCM2Q9BSQ5 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCM2Q9BSQ5 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CCM2Q9BSQ5 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.5■□□□□ 0.87
CCM2Q9BSQ5 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.5■□□□□ 0.87
CCM2Q9BSQ5 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.5■□□□□ 0.87
CCM2Q9BSQ5 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.5■□□□□ 0.87
CCM2Q9BSQ5 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCM2Q9BSQ5 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.5■□□□□ 0.87
CCM2Q9BSQ5 AC010536.3-201ENST00000620306 533 ntBASIC20.5■□□□□ 0.87
CCM2Q9BSQ5 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCM2Q9BSQ5 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCM2Q9BSQ5 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CCM2Q9BSQ5 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CCM2Q9BSQ5 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCM2Q9BSQ5 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.49■□□□□ 0.87
CCM2Q9BSQ5 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCM2Q9BSQ5 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CCM2Q9BSQ5 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.49■□□□□ 0.87
CCM2Q9BSQ5 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCM2Q9BSQ5 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CCM2Q9BSQ5 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.49■□□□□ 0.87
CCM2Q9BSQ5 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.49■□□□□ 0.87
CCM2Q9BSQ5 AC080038.1-201ENST00000611274 1154 ntBASIC20.49■□□□□ 0.87
CCM2Q9BSQ5 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CCM2Q9BSQ5 RARRES2P11-201ENST00000635158 484 ntBASIC20.49■□□□□ 0.87
CCM2Q9BSQ5 RBM17P2-201ENST00000616397 1405 ntBASIC20.49■□□□□ 0.87
CCM2Q9BSQ5 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCM2Q9BSQ5 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCM2Q9BSQ5 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCM2Q9BSQ5 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCM2Q9BSQ5 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.48■□□□□ 0.87
CCM2Q9BSQ5 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCM2Q9BSQ5 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CCM2Q9BSQ5 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.48■□□□□ 0.87
CCM2Q9BSQ5 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCM2Q9BSQ5 TERF1P5-201ENST00000477545 1207 ntBASIC20.48■□□□□ 0.87
CCM2Q9BSQ5 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CCM2Q9BSQ5 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CCM2Q9BSQ5 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.48■□□□□ 0.87
CCM2Q9BSQ5 AC243732.1-201ENST00000612648 864 ntBASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms