Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CLCC1Q96S66 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC17.45■□□□□ 0.38
CLCC1Q96S66 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLCC1Q96S66 AC244015.2-201ENST00000616358 1861 ntBASIC17.45■□□□□ 0.38
CLCC1Q96S66 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
CLCC1Q96S66 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC17.45■□□□□ 0.38
CLCC1Q96S66 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC17.45■□□□□ 0.38
CLCC1Q96S66 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLCC1Q96S66 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.45■□□□□ 0.38
CLCC1Q96S66 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLCC1Q96S66 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLCC1Q96S66 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLCC1Q96S66 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLCC1Q96S66 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLCC1Q96S66 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
CLCC1Q96S66 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLCC1Q96S66 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CLCC1Q96S66 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLCC1Q96S66 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
CLCC1Q96S66 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC17.44■□□□□ 0.38
CLCC1Q96S66 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CLCC1Q96S66 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLCC1Q96S66 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLCC1Q96S66 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CLCC1Q96S66 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CLCC1Q96S66 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
CLCC1Q96S66 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CLCC1Q96S66 PEMT-206ENST00000435340 960 ntTSL 5 BASIC17.44■□□□□ 0.38
CLCC1Q96S66 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CLCC1Q96S66 AC010525.1-201ENST00000585559 441 ntBASIC17.44■□□□□ 0.38
CLCC1Q96S66 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CLCC1Q96S66 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLCC1Q96S66 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLCC1Q96S66 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLCC1Q96S66 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
CLCC1Q96S66 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLCC1Q96S66 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC17.43■□□□□ 0.38
CLCC1Q96S66 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLCC1Q96S66 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC17.43■□□□□ 0.38
CLCC1Q96S66 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLCC1Q96S66 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLCC1Q96S66 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLCC1Q96S66 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLCC1Q96S66 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CLCC1Q96S66 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLCC1Q96S66 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CLCC1Q96S66 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC17.43■□□□□ 0.38
CLCC1Q96S66 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC17.43■□□□□ 0.38
CLCC1Q96S66 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC17.43■□□□□ 0.38
CLCC1Q96S66 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLCC1Q96S66 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLCC1Q96S66 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CLCC1Q96S66 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLCC1Q96S66 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLCC1Q96S66 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLCC1Q96S66 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC17.42■□□□□ 0.38
CLCC1Q96S66 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLCC1Q96S66 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC17.42■□□□□ 0.38
CLCC1Q96S66 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC17.42■□□□□ 0.38
CLCC1Q96S66 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
CLCC1Q96S66 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CLCC1Q96S66 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLCC1Q96S66 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CLCC1Q96S66 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLCC1Q96S66 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC17.42■□□□□ 0.38
CLCC1Q96S66 CA15P2-201ENST00000611168 834 ntBASIC17.42■□□□□ 0.38
CLCC1Q96S66 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLCC1Q96S66 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
CLCC1Q96S66 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLCC1Q96S66 STX4-202ENST00000394998 1498 ntTSL 2 BASIC17.42■□□□□ 0.38
CLCC1Q96S66 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLCC1Q96S66 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
CLCC1Q96S66 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLCC1Q96S66 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC17.42■□□□□ 0.38
CLCC1Q96S66 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLCC1Q96S66 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLCC1Q96S66 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLCC1Q96S66 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC17.41■□□□□ 0.38
CLCC1Q96S66 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLCC1Q96S66 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.41■□□□□ 0.38
CLCC1Q96S66 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLCC1Q96S66 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLCC1Q96S66 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLCC1Q96S66 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLCC1Q96S66 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLCC1Q96S66 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLCC1Q96S66 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLCC1Q96S66 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.41■□□□□ 0.38
CLCC1Q96S66 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLCC1Q96S66 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC17.41■□□□□ 0.38
CLCC1Q96S66 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLCC1Q96S66 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CLCC1Q96S66 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC17.41■□□□□ 0.38
CLCC1Q96S66 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC17.41■□□□□ 0.38
CLCC1Q96S66 AL138724.1-201ENST00000606771 1088 ntBASIC17.41■□□□□ 0.38
CLCC1Q96S66 AL136162.1-201ENST00000607711 1078 ntBASIC17.41■□□□□ 0.38
CLCC1Q96S66 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.41■□□□□ 0.38
CLCC1Q96S66 GOLGA2P6-201ENST00000340929 2049 ntBASIC17.41■□□□□ 0.38
CLCC1Q96S66 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLCC1Q96S66 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms