Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
NPIPB3Q92617 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPIPB3Q92617 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPIPB3Q92617 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NPIPB3Q92617 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPIPB3Q92617 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NPIPB3Q92617 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPIPB3Q92617 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPIPB3Q92617 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPIPB3Q92617 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NPIPB3Q92617 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
NPIPB3Q92617 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC16.41■□□□□ 0.22
NPIPB3Q92617 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NPIPB3Q92617 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPIPB3Q92617 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPIPB3Q92617 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPIPB3Q92617 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPIPB3Q92617 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPIPB3Q92617 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
NPIPB3Q92617 AC092667.1-201ENST00000434301 2586 ntBASIC16.41■□□□□ 0.22
NPIPB3Q92617 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NPIPB3Q92617 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
NPIPB3Q92617 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPIPB3Q92617 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
NPIPB3Q92617 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC16.41■□□□□ 0.22
NPIPB3Q92617 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
NPIPB3Q92617 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NPIPB3Q92617 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPIPB3Q92617 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NPIPB3Q92617 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
NPIPB3Q92617 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
NPIPB3Q92617 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
NPIPB3Q92617 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC16.4■□□□□ 0.22
NPIPB3Q92617 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
NPIPB3Q92617 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
NPIPB3Q92617 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
NPIPB3Q92617 AICDA-202ENST00000537228 667 ntTSL 5 BASIC16.4■□□□□ 0.22
NPIPB3Q92617 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NPIPB3Q92617 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC16.4■□□□□ 0.22
NPIPB3Q92617 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
NPIPB3Q92617 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC16.4■□□□□ 0.22
NPIPB3Q92617 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
NPIPB3Q92617 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NPIPB3Q92617 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC16.4■□□□□ 0.22
NPIPB3Q92617 AC135279.3-201ENST00000610945 1311 ntBASIC16.4■□□□□ 0.22
NPIPB3Q92617 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
NPIPB3Q92617 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC16.4■□□□□ 0.22
NPIPB3Q92617 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NPIPB3Q92617 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
NPIPB3Q92617 ERF-202ENST00000440177 2032 ntTSL 2 BASIC16.4■□□□□ 0.22
NPIPB3Q92617 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
NPIPB3Q92617 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC16.39■□□□□ 0.22
NPIPB3Q92617 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NPIPB3Q92617 AC121338.2-201ENST00000622535 1744 ntBASIC16.39■□□□□ 0.21
NPIPB3Q92617 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
NPIPB3Q92617 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NPIPB3Q92617 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
NPIPB3Q92617 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NPIPB3Q92617 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC16.39■□□□□ 0.21
NPIPB3Q92617 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NPIPB3Q92617 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NPIPB3Q92617 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NPIPB3Q92617 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
NPIPB3Q92617 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NPIPB3Q92617 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC16.39■□□□□ 0.21
NPIPB3Q92617 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC16.39■□□□□ 0.21
NPIPB3Q92617 AC008764.7-201ENST00000593779 1081 ntBASIC16.39■□□□□ 0.21
NPIPB3Q92617 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC16.39■□□□□ 0.21
NPIPB3Q92617 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
NPIPB3Q92617 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NPIPB3Q92617 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
NPIPB3Q92617 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NPIPB3Q92617 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
NPIPB3Q92617 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
NPIPB3Q92617 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NPIPB3Q92617 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC16.39■□□□□ 0.21
NPIPB3Q92617 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NPIPB3Q92617 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NPIPB3Q92617 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NPIPB3Q92617 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NPIPB3Q92617 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
NPIPB3Q92617 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NPIPB3Q92617 AC055733.4-201ENST00000638462 1354 ntBASIC16.38■□□□□ 0.21
NPIPB3Q92617 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC16.38■□□□□ 0.21
NPIPB3Q92617 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NPIPB3Q92617 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NPIPB3Q92617 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
NPIPB3Q92617 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NPIPB3Q92617 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC16.38■□□□□ 0.21
NPIPB3Q92617 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
NPIPB3Q92617 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NPIPB3Q92617 LHPP-203ENST00000392757 840 ntTSL 3 BASIC16.38■□□□□ 0.21
NPIPB3Q92617 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC16.38■□□□□ 0.21
NPIPB3Q92617 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NPIPB3Q92617 AC105233.4-201ENST00000642045 216 ntBASIC16.38■□□□□ 0.21
NPIPB3Q92617 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
NPIPB3Q92617 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
NPIPB3Q92617 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
NPIPB3Q92617 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
NPIPB3Q92617 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms