Protein–RNA interactions for Protein: Q8WVK7

SKA2, Spindle and kinetochore-associated protein 2, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2Q8WVK7 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.62■□□□□ 0.89
SKA2Q8WVK7 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SKA2Q8WVK7 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SKA2Q8WVK7 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.62■□□□□ 0.89
SKA2Q8WVK7 AC138932.1-201ENST00000534164 6830 ntBASIC20.62■□□□□ 0.89
SKA2Q8WVK7 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.62■□□□□ 0.89
SKA2Q8WVK7 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.62■□□□□ 0.89
SKA2Q8WVK7 MIR935-201ENST00000401179 91 ntBASIC20.62■□□□□ 0.89
SKA2Q8WVK7 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.62■□□□□ 0.89
SKA2Q8WVK7 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.62■□□□□ 0.89
SKA2Q8WVK7 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.62■□□□□ 0.89
SKA2Q8WVK7 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SKA2Q8WVK7 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SKA2Q8WVK7 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.62■□□□□ 0.89
SKA2Q8WVK7 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
SKA2Q8WVK7 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SKA2Q8WVK7 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SKA2Q8WVK7 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.61■□□□□ 0.89
SKA2Q8WVK7 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.61■□□□□ 0.89
SKA2Q8WVK7 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.61■□□□□ 0.89
SKA2Q8WVK7 AC008175.2-201ENST00000612840 297 ntBASIC20.61■□□□□ 0.89
SKA2Q8WVK7 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.61■□□□□ 0.89
SKA2Q8WVK7 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
SKA2Q8WVK7 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.61■□□□□ 0.89
SKA2Q8WVK7 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SKA2Q8WVK7 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
SKA2Q8WVK7 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
SKA2Q8WVK7 AL024507.2-201ENST00000606070 2574 ntBASIC20.6■□□□□ 0.89
SKA2Q8WVK7 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SKA2Q8WVK7 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SKA2Q8WVK7 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
SKA2Q8WVK7 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.6■□□□□ 0.89
SKA2Q8WVK7 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SKA2Q8WVK7 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SKA2Q8WVK7 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SKA2Q8WVK7 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
SKA2Q8WVK7 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SKA2Q8WVK7 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.6■□□□□ 0.89
SKA2Q8WVK7 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.6■□□□□ 0.89
SKA2Q8WVK7 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.6■□□□□ 0.89
SKA2Q8WVK7 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.6■□□□□ 0.89
SKA2Q8WVK7 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
SKA2Q8WVK7 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SKA2Q8WVK7 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SKA2Q8WVK7 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SKA2Q8WVK7 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SKA2Q8WVK7 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SKA2Q8WVK7 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SKA2Q8WVK7 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.59■□□□□ 0.89
SKA2Q8WVK7 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.59■□□□□ 0.89
SKA2Q8WVK7 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.59■□□□□ 0.89
SKA2Q8WVK7 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SKA2Q8WVK7 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SKA2Q8WVK7 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
SKA2Q8WVK7 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.59■□□□□ 0.89
SKA2Q8WVK7 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
SKA2Q8WVK7 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.59■□□□□ 0.89
SKA2Q8WVK7 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.59■□□□□ 0.89
SKA2Q8WVK7 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SKA2Q8WVK7 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.59■□□□□ 0.89
SKA2Q8WVK7 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.59■□□□□ 0.89
SKA2Q8WVK7 NTF6G-201ENST00000591094 616 ntBASIC20.59■□□□□ 0.89
SKA2Q8WVK7 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.59■□□□□ 0.89
SKA2Q8WVK7 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SKA2Q8WVK7 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SKA2Q8WVK7 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SKA2Q8WVK7 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.59■□□□□ 0.89
SKA2Q8WVK7 AC005229.4-201ENST00000610085 2198 ntBASIC20.59■□□□□ 0.89
SKA2Q8WVK7 FEM1AP4-201ENST00000443167 1987 ntBASIC20.59■□□□□ 0.89
SKA2Q8WVK7 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SKA2Q8WVK7 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
SKA2Q8WVK7 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SKA2Q8WVK7 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
SKA2Q8WVK7 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SKA2Q8WVK7 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SKA2Q8WVK7 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
SKA2Q8WVK7 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.58■□□□□ 0.89
SKA2Q8WVK7 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
SKA2Q8WVK7 AC026271.2-201ENST00000428091 497 ntBASIC20.58■□□□□ 0.89
SKA2Q8WVK7 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.58■□□□□ 0.89
SKA2Q8WVK7 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SKA2Q8WVK7 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
SKA2Q8WVK7 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SKA2Q8WVK7 AC061975.6-201ENST00000579045 1553 ntBASIC20.58■□□□□ 0.88
SKA2Q8WVK7 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SKA2Q8WVK7 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.58■□□□□ 0.88
SKA2Q8WVK7 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
SKA2Q8WVK7 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.57■□□□□ 0.88
SKA2Q8WVK7 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SKA2Q8WVK7 AP004607.4-201ENST00000530158 1459 ntBASIC20.57■□□□□ 0.88
SKA2Q8WVK7 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.57■□□□□ 0.88
SKA2Q8WVK7 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
SKA2Q8WVK7 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.57■□□□□ 0.88
SKA2Q8WVK7 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.57■□□□□ 0.88
SKA2Q8WVK7 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SKA2Q8WVK7 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SKA2Q8WVK7 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.57■□□□□ 0.88
SKA2Q8WVK7 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.57■□□□□ 0.88
SKA2Q8WVK7 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SKA2Q8WVK7 MIR5787-201ENST00000611784 55 ntBASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms