Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
EFCAB3Q8N7B9 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
EFCAB3Q8N7B9 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
EFCAB3Q8N7B9 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
EFCAB3Q8N7B9 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
EFCAB3Q8N7B9 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
EFCAB3Q8N7B9 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
EFCAB3Q8N7B9 AC123595.1-201ENST00000440769 1046 ntBASIC20.56■□□□□ 0.88
EFCAB3Q8N7B9 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC20.56■□□□□ 0.88
EFCAB3Q8N7B9 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.56■□□□□ 0.88
EFCAB3Q8N7B9 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.56■□□□□ 0.88
EFCAB3Q8N7B9 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
EFCAB3Q8N7B9 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
EFCAB3Q8N7B9 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
EFCAB3Q8N7B9 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
EFCAB3Q8N7B9 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
EFCAB3Q8N7B9 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
EFCAB3Q8N7B9 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
EFCAB3Q8N7B9 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.55■□□□□ 0.88
EFCAB3Q8N7B9 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
EFCAB3Q8N7B9 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.55■□□□□ 0.88
EFCAB3Q8N7B9 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
EFCAB3Q8N7B9 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
EFCAB3Q8N7B9 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
EFCAB3Q8N7B9 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
EFCAB3Q8N7B9 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.55■□□□□ 0.88
EFCAB3Q8N7B9 AC079089.2-201ENST00000531211 1277 ntBASIC20.55■□□□□ 0.88
EFCAB3Q8N7B9 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
EFCAB3Q8N7B9 AP001002.2-201ENST00000625137 386 ntBASIC20.55■□□□□ 0.88
EFCAB3Q8N7B9 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
EFCAB3Q8N7B9 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.55■□□□□ 0.88
EFCAB3Q8N7B9 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
EFCAB3Q8N7B9 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
EFCAB3Q8N7B9 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
EFCAB3Q8N7B9 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
EFCAB3Q8N7B9 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
EFCAB3Q8N7B9 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
EFCAB3Q8N7B9 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
EFCAB3Q8N7B9 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.54■□□□□ 0.88
EFCAB3Q8N7B9 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
EFCAB3Q8N7B9 PCDHAC2-203ENST00000615316 3011 ntBASIC20.54■□□□□ 0.88
EFCAB3Q8N7B9 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
EFCAB3Q8N7B9 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
EFCAB3Q8N7B9 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.54■□□□□ 0.88
EFCAB3Q8N7B9 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
EFCAB3Q8N7B9 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
EFCAB3Q8N7B9 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.54■□□□□ 0.88
EFCAB3Q8N7B9 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.54■□□□□ 0.88
EFCAB3Q8N7B9 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.54■□□□□ 0.88
EFCAB3Q8N7B9 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.54■□□□□ 0.88
EFCAB3Q8N7B9 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
EFCAB3Q8N7B9 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
EFCAB3Q8N7B9 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
EFCAB3Q8N7B9 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
EFCAB3Q8N7B9 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
EFCAB3Q8N7B9 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
EFCAB3Q8N7B9 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
EFCAB3Q8N7B9 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
EFCAB3Q8N7B9 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
EFCAB3Q8N7B9 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
EFCAB3Q8N7B9 OXCT2P1-201ENST00000447263 1535 ntBASIC20.53■□□□□ 0.88
EFCAB3Q8N7B9 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
EFCAB3Q8N7B9 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.53■□□□□ 0.88
EFCAB3Q8N7B9 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
EFCAB3Q8N7B9 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
EFCAB3Q8N7B9 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
EFCAB3Q8N7B9 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
EFCAB3Q8N7B9 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.53■□□□□ 0.88
EFCAB3Q8N7B9 AC027612.3-201ENST00000413684 1047 ntBASIC20.53■□□□□ 0.88
EFCAB3Q8N7B9 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.53■□□□□ 0.88
EFCAB3Q8N7B9 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.53■□□□□ 0.88
EFCAB3Q8N7B9 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.53■□□□□ 0.88
EFCAB3Q8N7B9 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.53■□□□□ 0.88
EFCAB3Q8N7B9 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.53■□□□□ 0.88
EFCAB3Q8N7B9 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.53■□□□□ 0.88
EFCAB3Q8N7B9 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
EFCAB3Q8N7B9 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
EFCAB3Q8N7B9 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.53■□□□□ 0.88
EFCAB3Q8N7B9 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
EFCAB3Q8N7B9 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
EFCAB3Q8N7B9 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.52■□□□□ 0.88
EFCAB3Q8N7B9 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
EFCAB3Q8N7B9 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
EFCAB3Q8N7B9 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
EFCAB3Q8N7B9 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.52■□□□□ 0.88
EFCAB3Q8N7B9 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
EFCAB3Q8N7B9 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
EFCAB3Q8N7B9 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
EFCAB3Q8N7B9 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
EFCAB3Q8N7B9 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.52■□□□□ 0.88
EFCAB3Q8N7B9 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
EFCAB3Q8N7B9 IGHV3-19-201ENST00000521488 291 ntBASIC20.52■□□□□ 0.88
EFCAB3Q8N7B9 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.52■□□□□ 0.88
EFCAB3Q8N7B9 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
EFCAB3Q8N7B9 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.52■□□□□ 0.88
EFCAB3Q8N7B9 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
EFCAB3Q8N7B9 FEM1AP1-201ENST00000431297 1995 ntBASIC20.52■□□□□ 0.87
EFCAB3Q8N7B9 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.52■□□□□ 0.87
EFCAB3Q8N7B9 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
EFCAB3Q8N7B9 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms