Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
TRIM42Q8IWZ5 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
TRIM42Q8IWZ5 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM42Q8IWZ5 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM42Q8IWZ5 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM42Q8IWZ5 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.72■□□□□ 0.91
TRIM42Q8IWZ5 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM42Q8IWZ5 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
TRIM42Q8IWZ5 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM42Q8IWZ5 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM42Q8IWZ5 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
TRIM42Q8IWZ5 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.72■□□□□ 0.91
TRIM42Q8IWZ5 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.72■□□□□ 0.91
TRIM42Q8IWZ5 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.72■□□□□ 0.91
TRIM42Q8IWZ5 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.72■□□□□ 0.91
TRIM42Q8IWZ5 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.72■□□□□ 0.91
TRIM42Q8IWZ5 MIR3181-201ENST00000578512 73 ntBASIC20.72■□□□□ 0.91
TRIM42Q8IWZ5 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.72■□□□□ 0.91
TRIM42Q8IWZ5 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.72■□□□□ 0.91
TRIM42Q8IWZ5 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.72■□□□□ 0.91
TRIM42Q8IWZ5 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.72■□□□□ 0.91
TRIM42Q8IWZ5 AC121338.2-201ENST00000622535 1744 ntBASIC20.72■□□□□ 0.91
TRIM42Q8IWZ5 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM42Q8IWZ5 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM42Q8IWZ5 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM42Q8IWZ5 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.72■□□□□ 0.91
TRIM42Q8IWZ5 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM42Q8IWZ5 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
TRIM42Q8IWZ5 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.72■□□□□ 0.91
TRIM42Q8IWZ5 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM42Q8IWZ5 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM42Q8IWZ5 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
TRIM42Q8IWZ5 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM42Q8IWZ5 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM42Q8IWZ5 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM42Q8IWZ5 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
TRIM42Q8IWZ5 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM42Q8IWZ5 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.71■□□□□ 0.91
TRIM42Q8IWZ5 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM42Q8IWZ5 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.71■□□□□ 0.91
TRIM42Q8IWZ5 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM42Q8IWZ5 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
TRIM42Q8IWZ5 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
TRIM42Q8IWZ5 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM42Q8IWZ5 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM42Q8IWZ5 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.71■□□□□ 0.91
TRIM42Q8IWZ5 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM42Q8IWZ5 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.7■□□□□ 0.91
TRIM42Q8IWZ5 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
TRIM42Q8IWZ5 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
TRIM42Q8IWZ5 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM42Q8IWZ5 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
TRIM42Q8IWZ5 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM42Q8IWZ5 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
TRIM42Q8IWZ5 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM42Q8IWZ5 AP006587.3-201ENST00000525742 1516 ntBASIC20.7■□□□□ 0.9
TRIM42Q8IWZ5 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.7■□□□□ 0.9
TRIM42Q8IWZ5 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM42Q8IWZ5 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
TRIM42Q8IWZ5 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.7■□□□□ 0.9
TRIM42Q8IWZ5 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
TRIM42Q8IWZ5 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
TRIM42Q8IWZ5 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM42Q8IWZ5 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM42Q8IWZ5 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM42Q8IWZ5 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM42Q8IWZ5 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.69■□□□□ 0.9
TRIM42Q8IWZ5 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM42Q8IWZ5 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM42Q8IWZ5 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.69■□□□□ 0.9
TRIM42Q8IWZ5 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
TRIM42Q8IWZ5 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.69■□□□□ 0.9
TRIM42Q8IWZ5 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
TRIM42Q8IWZ5 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.69■□□□□ 0.9
TRIM42Q8IWZ5 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.69■□□□□ 0.9
TRIM42Q8IWZ5 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.69■□□□□ 0.9
TRIM42Q8IWZ5 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM42Q8IWZ5 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.69■□□□□ 0.9
TRIM42Q8IWZ5 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM42Q8IWZ5 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM42Q8IWZ5 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM42Q8IWZ5 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM42Q8IWZ5 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM42Q8IWZ5 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM42Q8IWZ5 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM42Q8IWZ5 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.69■□□□□ 0.9
TRIM42Q8IWZ5 AC020907.5-201ENST00000624372 1936 ntBASIC20.68■□□□□ 0.9
TRIM42Q8IWZ5 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM42Q8IWZ5 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM42Q8IWZ5 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM42Q8IWZ5 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
TRIM42Q8IWZ5 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM42Q8IWZ5 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.68■□□□□ 0.9
TRIM42Q8IWZ5 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.68■□□□□ 0.9
TRIM42Q8IWZ5 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
TRIM42Q8IWZ5 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
TRIM42Q8IWZ5 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM42Q8IWZ5 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
TRIM42Q8IWZ5 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.68■□□□□ 0.9
TRIM42Q8IWZ5 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms