Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 AC245052.3-201ENST00000450182 901 ntBASIC21.72■■□□□ 1.07
PTCRAQ6ISU1 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.72■■□□□ 1.07
PTCRAQ6ISU1 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PTCRAQ6ISU1 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC21.72■■□□□ 1.07
PTCRAQ6ISU1 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC21.72■■□□□ 1.07
PTCRAQ6ISU1 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC21.72■■□□□ 1.07
PTCRAQ6ISU1 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC21.72■■□□□ 1.07
PTCRAQ6ISU1 RMI2-205ENST00000576027 818 ntTSL 2 BASIC21.72■■□□□ 1.07
PTCRAQ6ISU1 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC21.72■■□□□ 1.07
PTCRAQ6ISU1 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC21.72■■□□□ 1.07
PTCRAQ6ISU1 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC21.72■■□□□ 1.07
PTCRAQ6ISU1 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PTCRAQ6ISU1 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC21.72■■□□□ 1.07
PTCRAQ6ISU1 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PTCRAQ6ISU1 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PTCRAQ6ISU1 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.72■■□□□ 1.07
PTCRAQ6ISU1 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PTCRAQ6ISU1 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PTCRAQ6ISU1 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PTCRAQ6ISU1 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PTCRAQ6ISU1 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.71■■□□□ 1.07
PTCRAQ6ISU1 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
PTCRAQ6ISU1 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
PTCRAQ6ISU1 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PTCRAQ6ISU1 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PTCRAQ6ISU1 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PTCRAQ6ISU1 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC21.71■■□□□ 1.07
PTCRAQ6ISU1 TPM1-226ENST00000560959 925 ntTSL 2 BASIC21.71■■□□□ 1.07
PTCRAQ6ISU1 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC21.71■■□□□ 1.07
PTCRAQ6ISU1 AL353708.3-201ENST00000610272 989 ntBASIC21.71■■□□□ 1.07
PTCRAQ6ISU1 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC21.71■■□□□ 1.07
PTCRAQ6ISU1 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PTCRAQ6ISU1 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PTCRAQ6ISU1 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
PTCRAQ6ISU1 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PTCRAQ6ISU1 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PTCRAQ6ISU1 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC21.7■■□□□ 1.06
PTCRAQ6ISU1 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PTCRAQ6ISU1 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PTCRAQ6ISU1 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
PTCRAQ6ISU1 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.7■■□□□ 1.06
PTCRAQ6ISU1 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PTCRAQ6ISU1 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PTCRAQ6ISU1 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PTCRAQ6ISU1 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PTCRAQ6ISU1 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PTCRAQ6ISU1 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
PTCRAQ6ISU1 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
PTCRAQ6ISU1 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PTCRAQ6ISU1 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PTCRAQ6ISU1 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PTCRAQ6ISU1 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PTCRAQ6ISU1 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
PTCRAQ6ISU1 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PTCRAQ6ISU1 KRASP1-201ENST00000407852 552 ntBASIC21.69■■□□□ 1.06
PTCRAQ6ISU1 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC21.69■■□□□ 1.06
PTCRAQ6ISU1 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PTCRAQ6ISU1 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC21.69■■□□□ 1.06
PTCRAQ6ISU1 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
PTCRAQ6ISU1 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC21.69■■□□□ 1.06
PTCRAQ6ISU1 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
PTCRAQ6ISU1 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
PTCRAQ6ISU1 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.69■■□□□ 1.06
PTCRAQ6ISU1 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
PTCRAQ6ISU1 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PTCRAQ6ISU1 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PTCRAQ6ISU1 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PTCRAQ6ISU1 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PTCRAQ6ISU1 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PTCRAQ6ISU1 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC21.68■■□□□ 1.06
PTCRAQ6ISU1 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.68■■□□□ 1.06
PTCRAQ6ISU1 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC21.68■■□□□ 1.06
PTCRAQ6ISU1 RARRES2P10-201ENST00000564312 460 ntBASIC21.68■■□□□ 1.06
PTCRAQ6ISU1 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC21.68■■□□□ 1.06
PTCRAQ6ISU1 AC092865.7-201ENST00000641832 219 ntBASIC21.68■■□□□ 1.06
PTCRAQ6ISU1 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
PTCRAQ6ISU1 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
PTCRAQ6ISU1 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PTCRAQ6ISU1 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC21.68■■□□□ 1.06
PTCRAQ6ISU1 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC21.68■■□□□ 1.06
PTCRAQ6ISU1 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PTCRAQ6ISU1 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.68■■□□□ 1.06
PTCRAQ6ISU1 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PTCRAQ6ISU1 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PTCRAQ6ISU1 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PTCRAQ6ISU1 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.67■■□□□ 1.06
PTCRAQ6ISU1 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PTCRAQ6ISU1 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PTCRAQ6ISU1 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PTCRAQ6ISU1 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
PTCRAQ6ISU1 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PTCRAQ6ISU1 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PTCRAQ6ISU1 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PTCRAQ6ISU1 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC21.67■■□□□ 1.06
PTCRAQ6ISU1 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC21.67■■□□□ 1.06
PTCRAQ6ISU1 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PTCRAQ6ISU1 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PTCRAQ6ISU1 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PTCRAQ6ISU1 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
PTCRAQ6ISU1 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms