Protein–RNA interactions for Protein: Q5VVM6

CCDC30, Coiled-coil domain-containing protein 30, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30Q5VVM6 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CCDC30Q5VVM6 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
CCDC30Q5VVM6 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC26.66■■□□□ 1.86
CCDC30Q5VVM6 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
CCDC30Q5VVM6 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
CCDC30Q5VVM6 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC26.66■■□□□ 1.86
CCDC30Q5VVM6 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
CCDC30Q5VVM6 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC26.66■■□□□ 1.86
CCDC30Q5VVM6 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC26.66■■□□□ 1.86
CCDC30Q5VVM6 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
CCDC30Q5VVM6 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
CCDC30Q5VVM6 GUSBP6-202ENST00000438529 1198 ntBASIC26.66■■□□□ 1.86
CCDC30Q5VVM6 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC26.66■■□□□ 1.86
CCDC30Q5VVM6 AC016405.3-201ENST00000607710 860 ntBASIC26.66■■□□□ 1.86
CCDC30Q5VVM6 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC26.66■■□□□ 1.86
CCDC30Q5VVM6 AC008694.1-202ENST00000636953 945 ntBASIC26.66■■□□□ 1.86
CCDC30Q5VVM6 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC26.66■■□□□ 1.86
CCDC30Q5VVM6 AC079834.2-201ENST00000609776 1949 ntBASIC26.66■■□□□ 1.86
CCDC30Q5VVM6 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC26.66■■□□□ 1.86
CCDC30Q5VVM6 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
CCDC30Q5VVM6 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
CCDC30Q5VVM6 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC26.66■■□□□ 1.86
CCDC30Q5VVM6 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
CCDC30Q5VVM6 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC26.65■■□□□ 1.86
CCDC30Q5VVM6 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CCDC30Q5VVM6 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CCDC30Q5VVM6 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
CCDC30Q5VVM6 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
CCDC30Q5VVM6 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC26.65■■□□□ 1.86
CCDC30Q5VVM6 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC26.65■■□□□ 1.86
CCDC30Q5VVM6 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
CCDC30Q5VVM6 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CCDC30Q5VVM6 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC26.65■■□□□ 1.86
CCDC30Q5VVM6 PBX1-209ENST00000485769 834 ntTSL 2 BASIC26.65■■□□□ 1.86
CCDC30Q5VVM6 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC26.65■■□□□ 1.86
CCDC30Q5VVM6 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
CCDC30Q5VVM6 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
CCDC30Q5VVM6 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CCDC30Q5VVM6 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC26.65■■□□□ 1.86
CCDC30Q5VVM6 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC26.65■■□□□ 1.86
CCDC30Q5VVM6 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
CCDC30Q5VVM6 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC26.65■■□□□ 1.86
CCDC30Q5VVM6 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC26.64■■□□□ 1.86
CCDC30Q5VVM6 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
CCDC30Q5VVM6 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
CCDC30Q5VVM6 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC26.64■■□□□ 1.86
CCDC30Q5VVM6 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC26.64■■□□□ 1.86
CCDC30Q5VVM6 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC26.64■■□□□ 1.85
CCDC30Q5VVM6 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
CCDC30Q5VVM6 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
CCDC30Q5VVM6 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC26.63■■□□□ 1.85
CCDC30Q5VVM6 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC26.63■■□□□ 1.85
CCDC30Q5VVM6 AL512625.2-201ENST00000417533 625 ntBASIC26.63■■□□□ 1.85
CCDC30Q5VVM6 RARRES2P4-201ENST00000514074 484 ntBASIC26.63■■□□□ 1.85
CCDC30Q5VVM6 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC26.63■■□□□ 1.85
CCDC30Q5VVM6 GAMT-205ENST00000640762 751 ntTSL 5 BASIC26.63■■□□□ 1.85
CCDC30Q5VVM6 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CCDC30Q5VVM6 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC26.63■■□□□ 1.85
CCDC30Q5VVM6 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
CCDC30Q5VVM6 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
CCDC30Q5VVM6 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
CCDC30Q5VVM6 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CCDC30Q5VVM6 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CCDC30Q5VVM6 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CCDC30Q5VVM6 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC26.62■■□□□ 1.85
CCDC30Q5VVM6 PTPA-214ENST00000423100 988 ntTSL 2 BASIC26.62■■□□□ 1.85
CCDC30Q5VVM6 CDV3P1-201ENST00000471403 739 ntBASIC26.62■■□□□ 1.85
CCDC30Q5VVM6 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC26.62■■□□□ 1.85
CCDC30Q5VVM6 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC26.62■■□□□ 1.85
CCDC30Q5VVM6 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC26.62■■□□□ 1.85
CCDC30Q5VVM6 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC26.62■■□□□ 1.85
CCDC30Q5VVM6 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC26.62■■□□□ 1.85
CCDC30Q5VVM6 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
CCDC30Q5VVM6 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CCDC30Q5VVM6 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CCDC30Q5VVM6 LINC00565-201ENST00000562710 2331 ntBASIC26.61■■□□□ 1.85
CCDC30Q5VVM6 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC26.61■■□□□ 1.85
CCDC30Q5VVM6 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CCDC30Q5VVM6 AC093787.1-201ENST00000450396 207 ntBASIC26.61■■□□□ 1.85
CCDC30Q5VVM6 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
CCDC30Q5VVM6 EMC9-206ENST00000560403 872 ntTSL 2 BASIC26.61■■□□□ 1.85
CCDC30Q5VVM6 FAM21FP-204ENST00000608637 956 ntBASIC26.61■■□□□ 1.85
CCDC30Q5VVM6 PARN-205ENST00000539279 1557 ntTSL 2 BASIC26.61■■□□□ 1.85
CCDC30Q5VVM6 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC26.61■■□□□ 1.85
CCDC30Q5VVM6 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CCDC30Q5VVM6 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CCDC30Q5VVM6 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC26.61■■□□□ 1.85
CCDC30Q5VVM6 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC26.6■■□□□ 1.85
CCDC30Q5VVM6 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
CCDC30Q5VVM6 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CCDC30Q5VVM6 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC26.6■■□□□ 1.85
CCDC30Q5VVM6 CASP6-205ENST00000505486 538 ntTSL 4 BASIC26.6■■□□□ 1.85
CCDC30Q5VVM6 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC26.6■■□□□ 1.85
CCDC30Q5VVM6 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC26.6■■□□□ 1.85
CCDC30Q5VVM6 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC26.6■■□□□ 1.85
CCDC30Q5VVM6 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CCDC30Q5VVM6 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
CCDC30Q5VVM6 PALM-207ENST00000590161 2137 ntTSL 4 BASIC26.6■■□□□ 1.85
CCDC30Q5VVM6 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC26.6■■□□□ 1.85
CCDC30Q5VVM6 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC26.6■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms