Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
RNF220Q5VTB9 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.99■□□□□ 0.79
RNF220Q5VTB9 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
RNF220Q5VTB9 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF220Q5VTB9 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF220Q5VTB9 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RNF220Q5VTB9 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
RNF220Q5VTB9 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
RNF220Q5VTB9 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF220Q5VTB9 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.98■□□□□ 0.79
RNF220Q5VTB9 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
RNF220Q5VTB9 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.98■□□□□ 0.79
RNF220Q5VTB9 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF220Q5VTB9 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RNF220Q5VTB9 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
RNF220Q5VTB9 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF220Q5VTB9 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.98■□□□□ 0.79
RNF220Q5VTB9 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RNF220Q5VTB9 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RNF220Q5VTB9 SYT6-210ENST00000641643 1587 ntBASIC19.98■□□□□ 0.79
RNF220Q5VTB9 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF220Q5VTB9 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF220Q5VTB9 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.98■□□□□ 0.79
RNF220Q5VTB9 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF220Q5VTB9 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF220Q5VTB9 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
RNF220Q5VTB9 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
RNF220Q5VTB9 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF220Q5VTB9 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF220Q5VTB9 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
RNF220Q5VTB9 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.97■□□□□ 0.79
RNF220Q5VTB9 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.97■□□□□ 0.79
RNF220Q5VTB9 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF220Q5VTB9 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.97■□□□□ 0.79
RNF220Q5VTB9 AC079089.2-201ENST00000531211 1277 ntBASIC19.97■□□□□ 0.79
RNF220Q5VTB9 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.97■□□□□ 0.79
RNF220Q5VTB9 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RNF220Q5VTB9 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.97■□□□□ 0.79
RNF220Q5VTB9 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF220Q5VTB9 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RNF220Q5VTB9 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF220Q5VTB9 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF220Q5VTB9 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF220Q5VTB9 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF220Q5VTB9 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF220Q5VTB9 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF220Q5VTB9 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF220Q5VTB9 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF220Q5VTB9 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF220Q5VTB9 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.96■□□□□ 0.79
RNF220Q5VTB9 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF220Q5VTB9 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
RNF220Q5VTB9 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF220Q5VTB9 SERBP1P1-201ENST00000396021 1160 ntBASIC19.96■□□□□ 0.79
RNF220Q5VTB9 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.96■□□□□ 0.79
RNF220Q5VTB9 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.96■□□□□ 0.79
RNF220Q5VTB9 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
RNF220Q5VTB9 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF220Q5VTB9 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF220Q5VTB9 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF220Q5VTB9 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.96■□□□□ 0.79
RNF220Q5VTB9 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RNF220Q5VTB9 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
RNF220Q5VTB9 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
RNF220Q5VTB9 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF220Q5VTB9 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
RNF220Q5VTB9 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF220Q5VTB9 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.95■□□□□ 0.78
RNF220Q5VTB9 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF220Q5VTB9 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RNF220Q5VTB9 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.95■□□□□ 0.78
RNF220Q5VTB9 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF220Q5VTB9 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RNF220Q5VTB9 AC011298.3-201ENST00000615796 283 ntBASIC19.95■□□□□ 0.78
RNF220Q5VTB9 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
RNF220Q5VTB9 AC136469.2-201ENST00000623944 1028 ntBASIC19.95■□□□□ 0.78
RNF220Q5VTB9 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
RNF220Q5VTB9 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RNF220Q5VTB9 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF220Q5VTB9 SMG8-203ENST00000578922 2178 ntBASIC19.95■□□□□ 0.78
RNF220Q5VTB9 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.95■□□□□ 0.78
RNF220Q5VTB9 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF220Q5VTB9 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RNF220Q5VTB9 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF220Q5VTB9 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF220Q5VTB9 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF220Q5VTB9 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF220Q5VTB9 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF220Q5VTB9 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF220Q5VTB9 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
RNF220Q5VTB9 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.94■□□□□ 0.78
RNF220Q5VTB9 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.94■□□□□ 0.78
RNF220Q5VTB9 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.94■□□□□ 0.78
RNF220Q5VTB9 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
RNF220Q5VTB9 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RNF220Q5VTB9 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.94■□□□□ 0.78
RNF220Q5VTB9 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.94■□□□□ 0.78
RNF220Q5VTB9 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RNF220Q5VTB9 AC087239.1-201ENST00000622671 572 ntBASIC19.94■□□□□ 0.78
RNF220Q5VTB9 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms