Protein–RNA interactions for Protein: Q53EL6

PDCD4, Programmed cell death protein 4, humanhuman

Known RBP Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4Q53EL6 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDCD4Q53EL6 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
PDCD4Q53EL6 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20■□□□□ 0.79
PDCD4Q53EL6 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20■□□□□ 0.79
PDCD4Q53EL6 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20■□□□□ 0.79
PDCD4Q53EL6 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDCD4Q53EL6 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
PDCD4Q53EL6 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDCD4Q53EL6 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
PDCD4Q53EL6 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20■□□□□ 0.79
PDCD4Q53EL6 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20■□□□□ 0.79
PDCD4Q53EL6 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDCD4Q53EL6 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.99■□□□□ 0.79
PDCD4Q53EL6 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDCD4Q53EL6 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDCD4Q53EL6 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDCD4Q53EL6 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.99■□□□□ 0.79
PDCD4Q53EL6 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.99■□□□□ 0.79
PDCD4Q53EL6 MIR4767-201ENST00000582827 78 ntBASIC19.99■□□□□ 0.79
PDCD4Q53EL6 AC233992.3-201ENST00000607491 485 ntBASIC19.99■□□□□ 0.79
PDCD4Q53EL6 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDCD4Q53EL6 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.99■□□□□ 0.79
PDCD4Q53EL6 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.99■□□□□ 0.79
PDCD4Q53EL6 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
PDCD4Q53EL6 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDCD4Q53EL6 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PDCD4Q53EL6 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDCD4Q53EL6 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDCD4Q53EL6 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
PDCD4Q53EL6 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDCD4Q53EL6 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PDCD4Q53EL6 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.98■□□□□ 0.79
PDCD4Q53EL6 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PDCD4Q53EL6 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDCD4Q53EL6 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDCD4Q53EL6 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.98■□□□□ 0.79
PDCD4Q53EL6 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDCD4Q53EL6 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
PDCD4Q53EL6 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDCD4Q53EL6 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDCD4Q53EL6 IGHV3-19-201ENST00000521488 291 ntBASIC19.98■□□□□ 0.79
PDCD4Q53EL6 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.98■□□□□ 0.79
PDCD4Q53EL6 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PDCD4Q53EL6 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDCD4Q53EL6 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDCD4Q53EL6 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDCD4Q53EL6 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.98■□□□□ 0.79
PDCD4Q53EL6 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDCD4Q53EL6 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDCD4Q53EL6 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
PDCD4Q53EL6 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
PDCD4Q53EL6 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.97■□□□□ 0.79
PDCD4Q53EL6 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.97■□□□□ 0.79
PDCD4Q53EL6 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.97■□□□□ 0.79
PDCD4Q53EL6 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDCD4Q53EL6 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDCD4Q53EL6 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDCD4Q53EL6 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDCD4Q53EL6 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
PDCD4Q53EL6 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDCD4Q53EL6 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDCD4Q53EL6 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
PDCD4Q53EL6 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
PDCD4Q53EL6 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.96■□□□□ 0.79
PDCD4Q53EL6 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.96■□□□□ 0.79
PDCD4Q53EL6 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.96■□□□□ 0.79
PDCD4Q53EL6 AC027702.1-201ENST00000563810 1770 ntBASIC19.96■□□□□ 0.79
PDCD4Q53EL6 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDCD4Q53EL6 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDCD4Q53EL6 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.96■□□□□ 0.79
PDCD4Q53EL6 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.96■□□□□ 0.79
PDCD4Q53EL6 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PDCD4Q53EL6 AC007225.1-201ENST00000566331 1836 ntBASIC19.96■□□□□ 0.79
PDCD4Q53EL6 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDCD4Q53EL6 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDCD4Q53EL6 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDCD4Q53EL6 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PDCD4Q53EL6 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.96■□□□□ 0.79
PDCD4Q53EL6 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
PDCD4Q53EL6 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
PDCD4Q53EL6 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDCD4Q53EL6 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.95■□□□□ 0.78
PDCD4Q53EL6 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
PDCD4Q53EL6 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDCD4Q53EL6 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDCD4Q53EL6 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
PDCD4Q53EL6 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDCD4Q53EL6 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.95■□□□□ 0.78
PDCD4Q53EL6 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.95■□□□□ 0.78
PDCD4Q53EL6 AC126544.1-201ENST00000580842 1059 ntBASIC19.95■□□□□ 0.78
PDCD4Q53EL6 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.95■□□□□ 0.78
PDCD4Q53EL6 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDCD4Q53EL6 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.95■□□□□ 0.78
PDCD4Q53EL6 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDCD4Q53EL6 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.95■□□□□ 0.78
PDCD4Q53EL6 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
PDCD4Q53EL6 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
PDCD4Q53EL6 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.95■□□□□ 0.78
PDCD4Q53EL6 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDCD4Q53EL6 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 381.4 ms