Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
VBP1P61758 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VBP1P61758 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VBP1P61758 AC099778.1-201ENST00000568593 1911 ntBASIC18.69■□□□□ 0.58
VBP1P61758 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
VBP1P61758 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VBP1P61758 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
VBP1P61758 HYI-210ENST00000486909 905 ntTSL 5 BASIC18.69■□□□□ 0.58
VBP1P61758 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
VBP1P61758 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.69■□□□□ 0.58
VBP1P61758 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VBP1P61758 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VBP1P61758 AP000974.1-201ENST00000623909 2387 ntBASIC18.69■□□□□ 0.58
VBP1P61758 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.69■□□□□ 0.58
VBP1P61758 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VBP1P61758 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VBP1P61758 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
VBP1P61758 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VBP1P61758 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VBP1P61758 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
VBP1P61758 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VBP1P61758 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
VBP1P61758 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
VBP1P61758 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
VBP1P61758 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.68■□□□□ 0.58
VBP1P61758 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.68■□□□□ 0.58
VBP1P61758 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
VBP1P61758 KRT18P24-201ENST00000344739 1156 ntBASIC18.68■□□□□ 0.58
VBP1P61758 RPS2-202ENST00000526522 924 ntTSL 2 BASIC18.68■□□□□ 0.58
VBP1P61758 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC18.68■□□□□ 0.58
VBP1P61758 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VBP1P61758 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VBP1P61758 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.68■□□□□ 0.58
VBP1P61758 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
VBP1P61758 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
VBP1P61758 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
VBP1P61758 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.67■□□□□ 0.58
VBP1P61758 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VBP1P61758 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VBP1P61758 AC004408.2-201ENST00000623613 2777 ntBASIC18.67■□□□□ 0.58
VBP1P61758 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.67■□□□□ 0.58
VBP1P61758 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
VBP1P61758 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
VBP1P61758 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.67■□□□□ 0.58
VBP1P61758 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VBP1P61758 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC18.67■□□□□ 0.58
VBP1P61758 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VBP1P61758 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC18.67■□□□□ 0.58
VBP1P61758 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.67■□□□□ 0.58
VBP1P61758 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
VBP1P61758 AC007225.1-201ENST00000566331 1836 ntBASIC18.67■□□□□ 0.58
VBP1P61758 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VBP1P61758 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
VBP1P61758 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VBP1P61758 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
VBP1P61758 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VBP1P61758 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.66■□□□□ 0.58
VBP1P61758 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VBP1P61758 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
VBP1P61758 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VBP1P61758 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC18.66■□□□□ 0.58
VBP1P61758 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VBP1P61758 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VBP1P61758 MTX2-204ENST00000443241 799 ntTSL 3 BASIC18.66■□□□□ 0.58
VBP1P61758 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VBP1P61758 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VBP1P61758 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
VBP1P61758 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
VBP1P61758 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VBP1P61758 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.66■□□□□ 0.58
VBP1P61758 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VBP1P61758 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VBP1P61758 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
VBP1P61758 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC18.65■□□□□ 0.58
VBP1P61758 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
VBP1P61758 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
VBP1P61758 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.65■□□□□ 0.58
VBP1P61758 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.65■□□□□ 0.58
VBP1P61758 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
VBP1P61758 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
VBP1P61758 AC138932.1-201ENST00000534164 6830 ntBASIC18.65■□□□□ 0.58
VBP1P61758 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
VBP1P61758 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
VBP1P61758 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.65■□□□□ 0.58
VBP1P61758 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.64■□□□□ 0.58
VBP1P61758 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
VBP1P61758 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.58
VBP1P61758 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
VBP1P61758 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
VBP1P61758 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VBP1P61758 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
VBP1P61758 AC026471.1-201ENST00000564629 3026 ntBASIC18.64■□□□□ 0.57
VBP1P61758 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
VBP1P61758 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
VBP1P61758 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC18.64■□□□□ 0.57
VBP1P61758 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC18.64■□□□□ 0.57
VBP1P61758 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
VBP1P61758 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC18.64■□□□□ 0.57
VBP1P61758 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC18.64■□□□□ 0.57
VBP1P61758 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms