Protein–RNA interactions for Protein: P61018

RAB4B, Ras-related protein Rab-4B, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4BP61018 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
RAB4BP61018 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB4BP61018 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB4BP61018 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB4BP61018 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB4BP61018 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC16.17■□□□□ 0.18
RAB4BP61018 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RAB4BP61018 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB4BP61018 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB4BP61018 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB4BP61018 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB4BP61018 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB4BP61018 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB4BP61018 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB4BP61018 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
RAB4BP61018 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC16.16■□□□□ 0.18
RAB4BP61018 AC018445.3-201ENST00000624177 1945 ntBASIC16.16■□□□□ 0.18
RAB4BP61018 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB4BP61018 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB4BP61018 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB4BP61018 MTX2-204ENST00000443241 799 ntTSL 3 BASIC16.16■□□□□ 0.18
RAB4BP61018 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC16.16■□□□□ 0.18
RAB4BP61018 GAK-223ENST00000628912 497 ntTSL 5 BASIC16.16■□□□□ 0.18
RAB4BP61018 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC16.16■□□□□ 0.18
RAB4BP61018 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC16.16■□□□□ 0.18
RAB4BP61018 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC16.16■□□□□ 0.18
RAB4BP61018 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB4BP61018 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RAB4BP61018 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB4BP61018 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB4BP61018 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB4BP61018 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB4BP61018 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB4BP61018 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RAB4BP61018 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RAB4BP61018 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC16.15■□□□□ 0.18
RAB4BP61018 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB4BP61018 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB4BP61018 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB4BP61018 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB4BP61018 AC139795.1-202ENST00000500444 432 ntBASIC16.15■□□□□ 0.18
RAB4BP61018 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC16.15■□□□□ 0.18
RAB4BP61018 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB4BP61018 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RAB4BP61018 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC16.15■□□□□ 0.18
RAB4BP61018 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
RAB4BP61018 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RAB4BP61018 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
RAB4BP61018 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB4BP61018 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB4BP61018 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB4BP61018 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB4BP61018 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC16.15■□□□□ 0.18
RAB4BP61018 PCDHAC2-203ENST00000615316 3011 ntBASIC16.15■□□□□ 0.18
RAB4BP61018 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB4BP61018 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RAB4BP61018 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RAB4BP61018 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
RAB4BP61018 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC16.14■□□□□ 0.18
RAB4BP61018 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAB4BP61018 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RAB4BP61018 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
RAB4BP61018 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.14■□□□□ 0.17
RAB4BP61018 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAB4BP61018 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC16.14■□□□□ 0.17
RAB4BP61018 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC16.14■□□□□ 0.17
RAB4BP61018 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAB4BP61018 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RAB4BP61018 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
RAB4BP61018 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RAB4BP61018 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAB4BP61018 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RAB4BP61018 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC16.14■□□□□ 0.17
RAB4BP61018 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAB4BP61018 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC16.14■□□□□ 0.17
RAB4BP61018 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
RAB4BP61018 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
RAB4BP61018 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAB4BP61018 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAB4BP61018 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RAB4BP61018 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAB4BP61018 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAB4BP61018 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RAB4BP61018 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAB4BP61018 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAB4BP61018 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RAB4BP61018 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC16.13■□□□□ 0.17
RAB4BP61018 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RAB4BP61018 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB4BP61018 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB4BP61018 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.13■□□□□ 0.17
RAB4BP61018 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC16.13■□□□□ 0.17
RAB4BP61018 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB4BP61018 FEM1AP1-201ENST00000431297 1995 ntBASIC16.13■□□□□ 0.17
RAB4BP61018 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB4BP61018 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
RAB4BP61018 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB4BP61018 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB4BP61018 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RAB4BP61018 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms