Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
SMIM11AP58511 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.19■□□□□ 0.66
SMIM11AP58511 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.19■□□□□ 0.66
SMIM11AP58511 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SMIM11AP58511 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SMIM11AP58511 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMIM11AP58511 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMIM11AP58511 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMIM11AP58511 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMIM11AP58511 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
SMIM11AP58511 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMIM11AP58511 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMIM11AP58511 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
SMIM11AP58511 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMIM11AP58511 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMIM11AP58511 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SMIM11AP58511 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SMIM11AP58511 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMIM11AP58511 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMIM11AP58511 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SMIM11AP58511 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.18■□□□□ 0.66
SMIM11AP58511 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.18■□□□□ 0.66
SMIM11AP58511 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.18■□□□□ 0.66
SMIM11AP58511 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMIM11AP58511 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.18■□□□□ 0.66
SMIM11AP58511 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMIM11AP58511 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
SMIM11AP58511 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SMIM11AP58511 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMIM11AP58511 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMIM11AP58511 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.17■□□□□ 0.66
SMIM11AP58511 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMIM11AP58511 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SMIM11AP58511 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SMIM11AP58511 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
SMIM11AP58511 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.17■□□□□ 0.66
SMIM11AP58511 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMIM11AP58511 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SMIM11AP58511 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.17■□□□□ 0.66
SMIM11AP58511 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMIM11AP58511 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.17■□□□□ 0.66
SMIM11AP58511 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SMIM11AP58511 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMIM11AP58511 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SMIM11AP58511 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMIM11AP58511 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMIM11AP58511 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
SMIM11AP58511 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMIM11AP58511 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
SMIM11AP58511 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
SMIM11AP58511 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
SMIM11AP58511 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMIM11AP58511 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
SMIM11AP58511 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
SMIM11AP58511 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMIM11AP58511 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMIM11AP58511 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.16■□□□□ 0.66
SMIM11AP58511 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.16■□□□□ 0.66
SMIM11AP58511 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SMIM11AP58511 AC233992.3-201ENST00000607491 485 ntBASIC19.16■□□□□ 0.66
SMIM11AP58511 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.16■□□□□ 0.66
SMIM11AP58511 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SMIM11AP58511 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMIM11AP58511 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.16■□□□□ 0.66
SMIM11AP58511 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.16■□□□□ 0.66
SMIM11AP58511 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMIM11AP58511 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
SMIM11AP58511 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
SMIM11AP58511 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMIM11AP58511 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMIM11AP58511 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMIM11AP58511 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
SMIM11AP58511 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMIM11AP58511 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SMIM11AP58511 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
SMIM11AP58511 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SMIM11AP58511 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
SMIM11AP58511 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMIM11AP58511 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SMIM11AP58511 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SMIM11AP58511 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.15■□□□□ 0.66
SMIM11AP58511 AC126544.1-201ENST00000580842 1059 ntBASIC19.15■□□□□ 0.66
SMIM11AP58511 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.15■□□□□ 0.66
SMIM11AP58511 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMIM11AP58511 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMIM11AP58511 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMIM11AP58511 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.15■□□□□ 0.66
SMIM11AP58511 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.15■□□□□ 0.66
SMIM11AP58511 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.15■□□□□ 0.66
SMIM11AP58511 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
SMIM11AP58511 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SMIM11AP58511 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SMIM11AP58511 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SMIM11AP58511 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMIM11AP58511 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SMIM11AP58511 AC073314.1-201ENST00000568729 2216 ntBASIC19.15■□□□□ 0.66
SMIM11AP58511 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
SMIM11AP58511 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
SMIM11AP58511 AC092667.1-201ENST00000434301 2586 ntBASIC19.14■□□□□ 0.65
SMIM11AP58511 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms