Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CLDN8P56748 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.84■□□□□ 0.77
CLDN8P56748 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
CLDN8P56748 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLDN8P56748 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLDN8P56748 AC073314.1-201ENST00000568729 2216 ntBASIC19.83■□□□□ 0.77
CLDN8P56748 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.83■□□□□ 0.77
CLDN8P56748 AC092667.1-201ENST00000434301 2586 ntBASIC19.83■□□□□ 0.77
CLDN8P56748 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLDN8P56748 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLDN8P56748 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLDN8P56748 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLDN8P56748 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CLDN8P56748 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
CLDN8P56748 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CLDN8P56748 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLDN8P56748 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
CLDN8P56748 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.83■□□□□ 0.76
CLDN8P56748 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN8P56748 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN8P56748 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.82■□□□□ 0.76
CLDN8P56748 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN8P56748 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.82■□□□□ 0.76
CLDN8P56748 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN8P56748 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN8P56748 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.82■□□□□ 0.76
CLDN8P56748 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.82■□□□□ 0.76
CLDN8P56748 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.82■□□□□ 0.76
CLDN8P56748 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN8P56748 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN8P56748 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.82■□□□□ 0.76
CLDN8P56748 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CLDN8P56748 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
CLDN8P56748 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN8P56748 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN8P56748 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN8P56748 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN8P56748 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CLDN8P56748 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.81■□□□□ 0.76
CLDN8P56748 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN8P56748 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN8P56748 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.81■□□□□ 0.76
CLDN8P56748 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN8P56748 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN8P56748 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.81■□□□□ 0.76
CLDN8P56748 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.81■□□□□ 0.76
CLDN8P56748 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN8P56748 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.81■□□□□ 0.76
CLDN8P56748 AC007225.1-201ENST00000566331 1836 ntBASIC19.81■□□□□ 0.76
CLDN8P56748 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN8P56748 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN8P56748 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN8P56748 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN8P56748 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN8P56748 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.8■□□□□ 0.76
CLDN8P56748 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN8P56748 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN8P56748 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN8P56748 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN8P56748 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN8P56748 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN8P56748 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN8P56748 SUDS3P1-201ENST00000505831 966 ntBASIC19.8■□□□□ 0.76
CLDN8P56748 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.8■□□□□ 0.76
CLDN8P56748 TPRG1LP1-201ENST00000598702 760 ntBASIC19.8■□□□□ 0.76
CLDN8P56748 AL354811.1-201ENST00000610286 706 ntBASIC19.8■□□□□ 0.76
CLDN8P56748 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.8■□□□□ 0.76
CLDN8P56748 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN8P56748 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN8P56748 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN8P56748 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN8P56748 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN8P56748 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN8P56748 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN8P56748 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN8P56748 AP004607.4-201ENST00000530158 1459 ntBASIC19.79■□□□□ 0.76
CLDN8P56748 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN8P56748 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN8P56748 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN8P56748 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN8P56748 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.79■□□□□ 0.76
CLDN8P56748 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CLDN8P56748 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN8P56748 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.79■□□□□ 0.76
CLDN8P56748 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN8P56748 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN8P56748 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN8P56748 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN8P56748 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN8P56748 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.79■□□□□ 0.76
CLDN8P56748 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN8P56748 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN8P56748 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.78■□□□□ 0.76
CLDN8P56748 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN8P56748 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CLDN8P56748 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN8P56748 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN8P56748 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.78■□□□□ 0.76
CLDN8P56748 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CLDN8P56748 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms