Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
RXRBP28702 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC27.8■■■□□ 2.04
RXRBP28702 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC27.8■■■□□ 2.04
RXRBP28702 GLDC-219ENST00000640208 420 ntTSL 2 BASIC27.8■■■□□ 2.04
RXRBP28702 AC061975.6-201ENST00000579045 1553 ntBASIC27.8■■■□□ 2.04
RXRBP28702 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
RXRBP28702 AC145676.1-201ENST00000514988 2004 ntBASIC27.79■■■□□ 2.04
RXRBP28702 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
RXRBP28702 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC27.79■■■□□ 2.04
RXRBP28702 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
RXRBP28702 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
RXRBP28702 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC27.79■■■□□ 2.04
RXRBP28702 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC27.79■■■□□ 2.04
RXRBP28702 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC27.79■■■□□ 2.04
RXRBP28702 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC27.79■■■□□ 2.04
RXRBP28702 AC091076.1-201ENST00000610741 619 ntBASIC27.79■■■□□ 2.04
RXRBP28702 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
RXRBP28702 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC27.78■■■□□ 2.04
RXRBP28702 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC27.78■■■□□ 2.04
RXRBP28702 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC27.78■■■□□ 2.04
RXRBP28702 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
RXRBP28702 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
RXRBP28702 KRT18P22-201ENST00000402024 1347 ntBASIC27.78■■■□□ 2.04
RXRBP28702 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
RXRBP28702 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
RXRBP28702 GGT1-206ENST00000404223 952 ntTSL 2 BASIC27.78■■■□□ 2.04
RXRBP28702 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC27.78■■■□□ 2.04
RXRBP28702 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
RXRBP28702 DECR2-212ENST00000627716 352 ntTSL 2 BASIC27.78■■■□□ 2.04
RXRBP28702 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
RXRBP28702 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC27.78■■■□□ 2.04
RXRBP28702 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
RXRBP28702 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
RXRBP28702 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
RXRBP28702 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC27.77■■■□□ 2.04
RXRBP28702 RBM17P1-201ENST00000453646 1190 ntBASIC27.77■■■□□ 2.04
RXRBP28702 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC27.77■■■□□ 2.04
RXRBP28702 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC27.77■■■□□ 2.04
RXRBP28702 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC27.77■■■□□ 2.04
RXRBP28702 AL358472.4-201ENST00000633140 710 ntBASIC27.77■■■□□ 2.04
RXRBP28702 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.04
RXRBP28702 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC27.76■■■□□ 2.03
RXRBP28702 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC27.76■■■□□ 2.03
RXRBP28702 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC27.76■■■□□ 2.03
RXRBP28702 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC27.76■■■□□ 2.03
RXRBP28702 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC27.76■■■□□ 2.03
RXRBP28702 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC27.76■■■□□ 2.03
RXRBP28702 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
RXRBP28702 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC27.76■■■□□ 2.03
RXRBP28702 AC079598.2-202ENST00000546624 1451 ntBASIC27.76■■■□□ 2.03
RXRBP28702 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC27.75■■■□□ 2.03
RXRBP28702 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
RXRBP28702 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
RXRBP28702 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC27.75■■■□□ 2.03
RXRBP28702 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
RXRBP28702 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
RXRBP28702 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
RXRBP28702 AF186192.3-201ENST00000583427 947 ntBASIC27.75■■■□□ 2.03
RXRBP28702 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC27.75■■■□□ 2.03
RXRBP28702 VPS72-207ENST00000640458 689 ntTSL 5 BASIC27.75■■■□□ 2.03
RXRBP28702 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC27.75■■■□□ 2.03
RXRBP28702 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC27.75■■■□□ 2.03
RXRBP28702 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC27.75■■■□□ 2.03
RXRBP28702 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
RXRBP28702 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
RXRBP28702 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
RXRBP28702 KRT18P48-201ENST00000434763 852 ntBASIC27.74■■■□□ 2.03
RXRBP28702 SLC25A3P1-201ENST00000443844 931 ntBASIC27.74■■■□□ 2.03
RXRBP28702 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC27.74■■■□□ 2.03
RXRBP28702 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC27.74■■■□□ 2.03
RXRBP28702 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC27.74■■■□□ 2.03
RXRBP28702 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC27.74■■■□□ 2.03
RXRBP28702 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC27.74■■■□□ 2.03
RXRBP28702 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
RXRBP28702 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC27.74■■■□□ 2.03
RXRBP28702 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC27.73■■■□□ 2.03
RXRBP28702 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
RXRBP28702 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
RXRBP28702 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
RXRBP28702 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC27.73■■■□□ 2.03
RXRBP28702 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
RXRBP28702 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
RXRBP28702 VMO1-204ENST00000441199 741 ntTSL 2 BASIC27.73■■■□□ 2.03
RXRBP28702 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
RXRBP28702 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
RXRBP28702 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
RXRBP28702 RPS15-203ENST00000586096 570 ntTSL 2 BASIC27.73■■■□□ 2.03
RXRBP28702 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC27.73■■■□□ 2.03
RXRBP28702 AC087633.2-202ENST00000565166 1439 ntBASIC27.73■■■□□ 2.03
RXRBP28702 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC27.73■■■□□ 2.03
RXRBP28702 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
RXRBP28702 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC27.72■■■□□ 2.03
RXRBP28702 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC27.72■■■□□ 2.03
RXRBP28702 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC27.72■■■□□ 2.03
RXRBP28702 AP000525.1-201ENST00000608286 694 ntBASIC27.72■■■□□ 2.03
RXRBP28702 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
RXRBP28702 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC27.72■■■□□ 2.03
RXRBP28702 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
RXRBP28702 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
RXRBP28702 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC27.72■■■□□ 2.03
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms