Protein–RNA interactions for Protein: P16403

HIST1H1C, Histone H1.2, humanhuman

Known RBP Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1CP16403 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
HIST1H1CP16403 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.7■□□□□ 0.58
HIST1H1CP16403 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
HIST1H1CP16403 AC091305.1-201ENST00000479476 895 ntBASIC18.7■□□□□ 0.58
HIST1H1CP16403 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.7■□□□□ 0.58
HIST1H1CP16403 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.7■□□□□ 0.58
HIST1H1CP16403 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.7■□□□□ 0.58
HIST1H1CP16403 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.7■□□□□ 0.58
HIST1H1CP16403 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
HIST1H1CP16403 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HIST1H1CP16403 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HIST1H1CP16403 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HIST1H1CP16403 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.7■□□□□ 0.58
HIST1H1CP16403 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HIST1H1CP16403 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HIST1H1CP16403 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HIST1H1CP16403 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HIST1H1CP16403 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HIST1H1CP16403 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HIST1H1CP16403 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HIST1H1CP16403 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.69■□□□□ 0.58
HIST1H1CP16403 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HIST1H1CP16403 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HIST1H1CP16403 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.69■□□□□ 0.58
HIST1H1CP16403 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.69■□□□□ 0.58
HIST1H1CP16403 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.69■□□□□ 0.58
HIST1H1CP16403 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.69■□□□□ 0.58
HIST1H1CP16403 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.69■□□□□ 0.58
HIST1H1CP16403 AL031432.3-201ENST00000607698 485 ntBASIC18.69■□□□□ 0.58
HIST1H1CP16403 AL136967.2-201ENST00000623968 743 ntBASIC18.69■□□□□ 0.58
HIST1H1CP16403 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.69■□□□□ 0.58
HIST1H1CP16403 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.69■□□□□ 0.58
HIST1H1CP16403 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
HIST1H1CP16403 AC073314.1-201ENST00000568729 2216 ntBASIC18.69■□□□□ 0.58
HIST1H1CP16403 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
HIST1H1CP16403 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
HIST1H1CP16403 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
HIST1H1CP16403 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HIST1H1CP16403 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HIST1H1CP16403 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.68■□□□□ 0.58
HIST1H1CP16403 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HIST1H1CP16403 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
HIST1H1CP16403 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
HIST1H1CP16403 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HIST1H1CP16403 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.68■□□□□ 0.58
HIST1H1CP16403 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.68■□□□□ 0.58
HIST1H1CP16403 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.68■□□□□ 0.58
HIST1H1CP16403 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.68■□□□□ 0.58
HIST1H1CP16403 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HIST1H1CP16403 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HIST1H1CP16403 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HIST1H1CP16403 AP005212.1-201ENST00000581547 1997 ntBASIC18.68■□□□□ 0.58
HIST1H1CP16403 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.68■□□□□ 0.58
HIST1H1CP16403 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
HIST1H1CP16403 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
HIST1H1CP16403 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HIST1H1CP16403 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
HIST1H1CP16403 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
HIST1H1CP16403 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HIST1H1CP16403 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HIST1H1CP16403 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HIST1H1CP16403 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
HIST1H1CP16403 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.67■□□□□ 0.58
HIST1H1CP16403 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
HIST1H1CP16403 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.67■□□□□ 0.58
HIST1H1CP16403 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HIST1H1CP16403 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
HIST1H1CP16403 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HIST1H1CP16403 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.66■□□□□ 0.58
HIST1H1CP16403 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.66■□□□□ 0.58
HIST1H1CP16403 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HIST1H1CP16403 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HIST1H1CP16403 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HIST1H1CP16403 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.66■□□□□ 0.58
HIST1H1CP16403 AC012414.1-201ENST00000556676 535 ntBASIC18.66■□□□□ 0.58
HIST1H1CP16403 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HIST1H1CP16403 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
HIST1H1CP16403 GABARAPL3-202ENST00000624044 1851 ntBASIC18.66■□□□□ 0.58
HIST1H1CP16403 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HIST1H1CP16403 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HIST1H1CP16403 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HIST1H1CP16403 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HIST1H1CP16403 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HIST1H1CP16403 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HIST1H1CP16403 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
HIST1H1CP16403 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HIST1H1CP16403 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HIST1H1CP16403 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HIST1H1CP16403 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.65■□□□□ 0.58
HIST1H1CP16403 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HIST1H1CP16403 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HIST1H1CP16403 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
HIST1H1CP16403 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HIST1H1CP16403 NALT1-201ENST00000429224 738 ntTSL 5 BASIC18.65■□□□□ 0.58
HIST1H1CP16403 EEF1DP3-203ENST00000566025 782 ntBASIC18.65■□□□□ 0.58
HIST1H1CP16403 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.65■□□□□ 0.58
HIST1H1CP16403 AC053503.5-201ENST00000601508 636 ntBASIC18.65■□□□□ 0.58
HIST1H1CP16403 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HIST1H1CP16403 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HIST1H1CP16403 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms