Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MT-ND1P03886 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MT-ND1P03886 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MT-ND1P03886 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MT-ND1P03886 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MT-ND1P03886 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MT-ND1P03886 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
MT-ND1P03886 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MT-ND1P03886 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MT-ND1P03886 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.62■□□□□ 0.73
MT-ND1P03886 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
MT-ND1P03886 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
MT-ND1P03886 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.62■□□□□ 0.73
MT-ND1P03886 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MT-ND1P03886 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
MT-ND1P03886 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
MT-ND1P03886 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
MT-ND1P03886 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
MT-ND1P03886 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.62■□□□□ 0.73
MT-ND1P03886 AC027702.1-201ENST00000563810 1770 ntBASIC19.62■□□□□ 0.73
MT-ND1P03886 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MT-ND1P03886 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.61■□□□□ 0.73
MT-ND1P03886 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MT-ND1P03886 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.61■□□□□ 0.73
MT-ND1P03886 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MT-ND1P03886 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
MT-ND1P03886 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MT-ND1P03886 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.61■□□□□ 0.73
MT-ND1P03886 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.61■□□□□ 0.73
MT-ND1P03886 DUX4L19-201ENST00000557448 1267 ntBASIC19.61■□□□□ 0.73
MT-ND1P03886 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.61■□□□□ 0.73
MT-ND1P03886 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.61■□□□□ 0.73
MT-ND1P03886 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
MT-ND1P03886 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MT-ND1P03886 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MT-ND1P03886 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
MT-ND1P03886 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.61■□□□□ 0.73
MT-ND1P03886 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MT-ND1P03886 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MT-ND1P03886 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MT-ND1P03886 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.6■□□□□ 0.73
MT-ND1P03886 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
MT-ND1P03886 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
MT-ND1P03886 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MT-ND1P03886 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.6■□□□□ 0.73
MT-ND1P03886 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
MT-ND1P03886 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MT-ND1P03886 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MT-ND1P03886 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
MT-ND1P03886 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
MT-ND1P03886 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
MT-ND1P03886 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MT-ND1P03886 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
MT-ND1P03886 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.6■□□□□ 0.73
MT-ND1P03886 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
MT-ND1P03886 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.6■□□□□ 0.73
MT-ND1P03886 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.6■□□□□ 0.73
MT-ND1P03886 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.6■□□□□ 0.73
MT-ND1P03886 MIR4466-201ENST00000606121 54 ntBASIC19.6■□□□□ 0.73
MT-ND1P03886 AL138724.1-201ENST00000606771 1088 ntBASIC19.6■□□□□ 0.73
MT-ND1P03886 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.6■□□□□ 0.73
MT-ND1P03886 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
MT-ND1P03886 SYT6-210ENST00000641643 1587 ntBASIC19.6■□□□□ 0.73
MT-ND1P03886 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MT-ND1P03886 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
MT-ND1P03886 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
MT-ND1P03886 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MT-ND1P03886 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.6■□□□□ 0.73
MT-ND1P03886 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MT-ND1P03886 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.59■□□□□ 0.73
MT-ND1P03886 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MT-ND1P03886 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.59■□□□□ 0.73
MT-ND1P03886 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.59■□□□□ 0.73
MT-ND1P03886 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
MT-ND1P03886 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MT-ND1P03886 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
MT-ND1P03886 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
MT-ND1P03886 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
MT-ND1P03886 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
MT-ND1P03886 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.59■□□□□ 0.73
MT-ND1P03886 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
MT-ND1P03886 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
MT-ND1P03886 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
MT-ND1P03886 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MT-ND1P03886 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
MT-ND1P03886 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.59■□□□□ 0.73
MT-ND1P03886 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
MT-ND1P03886 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MT-ND1P03886 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
MT-ND1P03886 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MT-ND1P03886 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
MT-ND1P03886 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
MT-ND1P03886 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.58■□□□□ 0.73
MT-ND1P03886 SERBP1P1-201ENST00000396021 1160 ntBASIC19.58■□□□□ 0.72
MT-ND1P03886 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
MT-ND1P03886 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
MT-ND1P03886 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
MT-ND1P03886 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.58■□□□□ 0.72
MT-ND1P03886 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
MT-ND1P03886 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms