Protein–RNA interactions for Protein: O95167

NDUFA3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3O95167 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC16.67■□□□□ 0.26
NDUFA3O95167 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
NDUFA3O95167 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NDUFA3O95167 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC16.67■□□□□ 0.26
NDUFA3O95167 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC16.67■□□□□ 0.26
NDUFA3O95167 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NDUFA3O95167 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NDUFA3O95167 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC16.67■□□□□ 0.26
NDUFA3O95167 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NDUFA3O95167 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
NDUFA3O95167 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
NDUFA3O95167 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NDUFA3O95167 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
NDUFA3O95167 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NDUFA3O95167 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NDUFA3O95167 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NDUFA3O95167 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NDUFA3O95167 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
NDUFA3O95167 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NDUFA3O95167 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
NDUFA3O95167 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC16.66■□□□□ 0.26
NDUFA3O95167 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC16.66■□□□□ 0.26
NDUFA3O95167 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NDUFA3O95167 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NDUFA3O95167 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
NDUFA3O95167 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC16.66■□□□□ 0.26
NDUFA3O95167 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NDUFA3O95167 PALM-207ENST00000590161 2137 ntTSL 4 BASIC16.66■□□□□ 0.26
NDUFA3O95167 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NDUFA3O95167 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NDUFA3O95167 AF106564.1-201ENST00000607058 2553 ntBASIC16.65■□□□□ 0.26
NDUFA3O95167 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NDUFA3O95167 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC16.65■□□□□ 0.26
NDUFA3O95167 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
NDUFA3O95167 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
NDUFA3O95167 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
NDUFA3O95167 SLC7A5P1-201ENST00000568957 537 ntBASIC16.65■□□□□ 0.26
NDUFA3O95167 MIR5787-201ENST00000611784 55 ntBASIC16.65■□□□□ 0.26
NDUFA3O95167 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
NDUFA3O95167 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
NDUFA3O95167 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
NDUFA3O95167 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NDUFA3O95167 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
NDUFA3O95167 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC16.65■□□□□ 0.26
NDUFA3O95167 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NDUFA3O95167 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
NDUFA3O95167 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NDUFA3O95167 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
NDUFA3O95167 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NDUFA3O95167 AC005229.4-201ENST00000610085 2198 ntBASIC16.64■□□□□ 0.25
NDUFA3O95167 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NDUFA3O95167 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NDUFA3O95167 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
NDUFA3O95167 KRT18P5-201ENST00000436075 1291 ntBASIC16.64■□□□□ 0.25
NDUFA3O95167 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC16.64■□□□□ 0.25
NDUFA3O95167 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NDUFA3O95167 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
NDUFA3O95167 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC16.64■□□□□ 0.25
NDUFA3O95167 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NDUFA3O95167 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC16.64■□□□□ 0.25
NDUFA3O95167 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
NDUFA3O95167 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
NDUFA3O95167 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NDUFA3O95167 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NDUFA3O95167 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
NDUFA3O95167 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NDUFA3O95167 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NDUFA3O95167 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NDUFA3O95167 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
NDUFA3O95167 PALM-208ENST00000592155 2272 ntTSL 4 BASIC16.63■□□□□ 0.25
NDUFA3O95167 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC16.63■□□□□ 0.25
NDUFA3O95167 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NDUFA3O95167 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NDUFA3O95167 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC16.63■□□□□ 0.25
NDUFA3O95167 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
NDUFA3O95167 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NDUFA3O95167 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NDUFA3O95167 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NDUFA3O95167 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC16.63■□□□□ 0.25
NDUFA3O95167 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC16.63■□□□□ 0.25
NDUFA3O95167 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC16.63■□□□□ 0.25
NDUFA3O95167 SLC7A5P2-201ENST00000553010 536 ntBASIC16.63■□□□□ 0.25
NDUFA3O95167 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NDUFA3O95167 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC16.63■□□□□ 0.25
NDUFA3O95167 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
NDUFA3O95167 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC16.63■□□□□ 0.25
NDUFA3O95167 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
NDUFA3O95167 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NDUFA3O95167 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC16.63■□□□□ 0.25
NDUFA3O95167 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
NDUFA3O95167 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NDUFA3O95167 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NDUFA3O95167 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
NDUFA3O95167 AL137060.1-201ENST00000618151 2648 ntBASIC16.63■□□□□ 0.25
NDUFA3O95167 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NDUFA3O95167 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NDUFA3O95167 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
NDUFA3O95167 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC16.62■□□□□ 0.25
NDUFA3O95167 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
NDUFA3O95167 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms