Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
HFM1A2PYH4 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC31.07■■■□□ 2.56
HFM1A2PYH4 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC31.07■■■□□ 2.56
HFM1A2PYH4 CASP6-205ENST00000505486 538 ntTSL 4 BASIC31.07■■■□□ 2.56
HFM1A2PYH4 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC31.06■■■□□ 2.56
HFM1A2PYH4 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC31.06■■■□□ 2.56
HFM1A2PYH4 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
HFM1A2PYH4 DYM-203ENST00000442713 2147 ntTSL 2 BASIC31.06■■■□□ 2.56
HFM1A2PYH4 PBX1-209ENST00000485769 834 ntTSL 2 BASIC31.06■■■□□ 2.56
HFM1A2PYH4 PHB2-213ENST00000546111 858 ntTSL 2 BASIC31.06■■■□□ 2.56
HFM1A2PYH4 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
HFM1A2PYH4 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
HFM1A2PYH4 AC010980.2-201ENST00000587099 1412 ntBASIC31.05■■■□□ 2.56
HFM1A2PYH4 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
HFM1A2PYH4 MKRN4P-201ENST00000444706 1521 ntBASIC31.05■■■□□ 2.56
HFM1A2PYH4 EXOC3-AS1-202ENST00000623673 1663 ntBASIC31.05■■■□□ 2.56
HFM1A2PYH4 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC31.05■■■□□ 2.56
HFM1A2PYH4 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
HFM1A2PYH4 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC31.05■■■□□ 2.56
HFM1A2PYH4 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
HFM1A2PYH4 ABHD17AP1-201ENST00000358206 933 ntBASIC31.05■■■□□ 2.56
HFM1A2PYH4 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC31.05■■■□□ 2.56
HFM1A2PYH4 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC31.04■■■□□ 2.56
HFM1A2PYH4 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
HFM1A2PYH4 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC31.04■■■□□ 2.56
HFM1A2PYH4 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
HFM1A2PYH4 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC31.04■■■□□ 2.56
HFM1A2PYH4 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC31.03■■■□□ 2.56
HFM1A2PYH4 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC31.03■■■□□ 2.56
HFM1A2PYH4 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
HFM1A2PYH4 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC31.03■■■□□ 2.56
HFM1A2PYH4 SLC29A4P1-201ENST00000398760 971 ntBASIC31.03■■■□□ 2.56
HFM1A2PYH4 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
HFM1A2PYH4 AC073210.2-201ENST00000430369 194 ntBASIC31.03■■■□□ 2.56
HFM1A2PYH4 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
HFM1A2PYH4 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC31.03■■■□□ 2.56
HFM1A2PYH4 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC31.03■■■□□ 2.56
HFM1A2PYH4 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC31.03■■■□□ 2.56
HFM1A2PYH4 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC31.03■■■□□ 2.56
HFM1A2PYH4 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
HFM1A2PYH4 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC31.02■■■□□ 2.56
HFM1A2PYH4 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
HFM1A2PYH4 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
HFM1A2PYH4 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC31.02■■■□□ 2.56
HFM1A2PYH4 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
HFM1A2PYH4 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
HFM1A2PYH4 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC31.02■■■□□ 2.56
HFM1A2PYH4 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC31.02■■■□□ 2.56
HFM1A2PYH4 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC31.02■■■□□ 2.56
HFM1A2PYH4 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC31.01■■■□□ 2.56
HFM1A2PYH4 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC31.01■■■□□ 2.56
HFM1A2PYH4 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC31.01■■■□□ 2.56
HFM1A2PYH4 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
HFM1A2PYH4 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC31.01■■■□□ 2.55
HFM1A2PYH4 AC007322.3-201ENST00000426526 701 ntBASIC31.01■■■□□ 2.55
HFM1A2PYH4 AC069152.1-201ENST00000438030 544 ntBASIC31.01■■■□□ 2.55
HFM1A2PYH4 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC31.01■■■□□ 2.55
HFM1A2PYH4 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC31.01■■■□□ 2.55
HFM1A2PYH4 AC092118.2-201ENST00000613495 667 ntBASIC31.01■■■□□ 2.55
HFM1A2PYH4 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC31.01■■■□□ 2.55
HFM1A2PYH4 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC31.01■■■□□ 2.55
HFM1A2PYH4 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
HFM1A2PYH4 AC079834.2-201ENST00000609776 1949 ntBASIC31.01■■■□□ 2.55
HFM1A2PYH4 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
HFM1A2PYH4 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC31.01■■■□□ 2.55
HFM1A2PYH4 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC31■■■□□ 2.55
HFM1A2PYH4 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
HFM1A2PYH4 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC31■■■□□ 2.55
HFM1A2PYH4 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC31■■■□□ 2.55
HFM1A2PYH4 MIPEPP3-201ENST00000412105 444 ntBASIC31■■■□□ 2.55
HFM1A2PYH4 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC31■■■□□ 2.55
HFM1A2PYH4 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC31■■■□□ 2.55
HFM1A2PYH4 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
HFM1A2PYH4 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
HFM1A2PYH4 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
HFM1A2PYH4 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC31■■■□□ 2.55
HFM1A2PYH4 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC31■■■□□ 2.55
HFM1A2PYH4 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
HFM1A2PYH4 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC31■■■□□ 2.55
HFM1A2PYH4 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC31■■■□□ 2.55
HFM1A2PYH4 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC30.99■■■□□ 2.55
HFM1A2PYH4 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC30.99■■■□□ 2.55
HFM1A2PYH4 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC30.99■■■□□ 2.55
HFM1A2PYH4 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC30.99■■■□□ 2.55
HFM1A2PYH4 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC30.99■■■□□ 2.55
HFM1A2PYH4 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC30.99■■■□□ 2.55
HFM1A2PYH4 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC30.99■■■□□ 2.55
HFM1A2PYH4 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC30.99■■■□□ 2.55
HFM1A2PYH4 AC008694.1-202ENST00000636953 945 ntBASIC30.99■■■□□ 2.55
HFM1A2PYH4 PALM-207ENST00000590161 2137 ntTSL 4 BASIC30.99■■■□□ 2.55
HFM1A2PYH4 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC30.99■■■□□ 2.55
HFM1A2PYH4 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC30.99■■■□□ 2.55
HFM1A2PYH4 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
HFM1A2PYH4 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC30.98■■■□□ 2.55
HFM1A2PYH4 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC30.98■■■□□ 2.55
HFM1A2PYH4 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC30.98■■■□□ 2.55
HFM1A2PYH4 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC30.98■■■□□ 2.55
HFM1A2PYH4 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC30.98■■■□□ 2.55
HFM1A2PYH4 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
HFM1A2PYH4 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC30.98■■■□□ 2.55
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms