Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.78■□□□□ 0.92
CCDC189A1A4V9 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC189A1A4V9 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC189A1A4V9 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CCDC189A1A4V9 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC189A1A4V9 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC189A1A4V9 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC189A1A4V9 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.78■□□□□ 0.92
CCDC189A1A4V9 EDA-201ENST00000338901 1233 ntBASIC20.78■□□□□ 0.92
CCDC189A1A4V9 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.78■□□□□ 0.92
CCDC189A1A4V9 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.78■□□□□ 0.92
CCDC189A1A4V9 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.78■□□□□ 0.92
CCDC189A1A4V9 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC189A1A4V9 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.78■□□□□ 0.92
CCDC189A1A4V9 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC189A1A4V9 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC189A1A4V9 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CCDC189A1A4V9 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
CCDC189A1A4V9 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC189A1A4V9 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC189A1A4V9 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CCDC189A1A4V9 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC189A1A4V9 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC189A1A4V9 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC189A1A4V9 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC189A1A4V9 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC189A1A4V9 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC189A1A4V9 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC189A1A4V9 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC189A1A4V9 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC189A1A4V9 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.77■□□□□ 0.92
CCDC189A1A4V9 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.77■□□□□ 0.92
CCDC189A1A4V9 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC189A1A4V9 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.77■□□□□ 0.92
CCDC189A1A4V9 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC189A1A4V9 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC189A1A4V9 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC189A1A4V9 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC189A1A4V9 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC189A1A4V9 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.77■□□□□ 0.91
CCDC189A1A4V9 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CCDC189A1A4V9 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CCDC189A1A4V9 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC189A1A4V9 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.76■□□□□ 0.91
CCDC189A1A4V9 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC189A1A4V9 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
CCDC189A1A4V9 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.76■□□□□ 0.91
CCDC189A1A4V9 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC189A1A4V9 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC189A1A4V9 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.76■□□□□ 0.91
CCDC189A1A4V9 AC131212.1-201ENST00000613771 668 ntBASIC20.76■□□□□ 0.91
CCDC189A1A4V9 AC106739.1-201ENST00000617035 715 ntBASIC20.76■□□□□ 0.91
CCDC189A1A4V9 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.76■□□□□ 0.91
CCDC189A1A4V9 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.76■□□□□ 0.91
CCDC189A1A4V9 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC189A1A4V9 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
CCDC189A1A4V9 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
CCDC189A1A4V9 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
CCDC189A1A4V9 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC189A1A4V9 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC189A1A4V9 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC189A1A4V9 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC189A1A4V9 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC189A1A4V9 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.75■□□□□ 0.91
CCDC189A1A4V9 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC189A1A4V9 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CCDC189A1A4V9 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC189A1A4V9 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.75■□□□□ 0.91
CCDC189A1A4V9 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CCDC189A1A4V9 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CCDC189A1A4V9 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.75■□□□□ 0.91
CCDC189A1A4V9 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.75■□□□□ 0.91
CCDC189A1A4V9 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC189A1A4V9 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC189A1A4V9 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CCDC189A1A4V9 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.75■□□□□ 0.91
CCDC189A1A4V9 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC189A1A4V9 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC189A1A4V9 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC189A1A4V9 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC189A1A4V9 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.74■□□□□ 0.91
CCDC189A1A4V9 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.74■□□□□ 0.91
CCDC189A1A4V9 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CCDC189A1A4V9 AC008406.3-201ENST00000620001 1374 ntBASIC20.74■□□□□ 0.91
CCDC189A1A4V9 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC189A1A4V9 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC189A1A4V9 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CCDC189A1A4V9 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC189A1A4V9 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC189A1A4V9 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC189A1A4V9 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.74■□□□□ 0.91
CCDC189A1A4V9 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.74■□□□□ 0.91
CCDC189A1A4V9 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.74■□□□□ 0.91
CCDC189A1A4V9 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.74■□□□□ 0.91
CCDC189A1A4V9 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC189A1A4V9 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC189A1A4V9 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC189A1A4V9 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.74■□□□□ 0.91
CCDC189A1A4V9 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.74■□□□□ 0.91
CCDC189A1A4V9 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms