Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC007557.2-201ENST00000440900 583 ntTSL 2 BASIC9.38□□□□□ -0.91
NPIPA3F8WFD2 AC107421.1-201ENST00000477300 404 ntBASIC9.38□□□□□ -0.91
NPIPA3F8WFD2 RPL12P6-201ENST00000495231 498 ntBASIC9.38□□□□□ -0.91
NPIPA3F8WFD2 AC034245.1-201ENST00000504349 1227 ntTSL 5 BASIC9.38□□□□□ -0.91
NPIPA3F8WFD2 AC245052.6-201ENST00000506567 219 ntBASIC9.38□□□□□ -0.91
NPIPA3F8WFD2 PPIAP11-201ENST00000510729 493 ntBASIC9.38□□□□□ -0.91
NPIPA3F8WFD2 IFITM9P-201ENST00000535743 396 ntBASIC9.38□□□□□ -0.91
NPIPA3F8WFD2 CLEC4C-204ENST00000540085 860 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
NPIPA3F8WFD2 C14orf2-210ENST00000555030 749 ntTSL 3 BASIC9.38□□□□□ -0.91
NPIPA3F8WFD2 YWHAE-210ENST00000573026 780 ntTSL 3 BASIC9.38□□□□□ -0.91
NPIPA3F8WFD2 AC104984.4-201ENST00000577420 224 ntTSL 3 BASIC9.38□□□□□ -0.91
NPIPA3F8WFD2 MIR3911-201ENST00000577791 109 ntBASIC9.38□□□□□ -0.91
NPIPA3F8WFD2 APCDD1-203ENST00000578882 559 ntTSL 3 BASIC9.38□□□□□ -0.91
NPIPA3F8WFD2 MIR4283-2-201ENST00000578980 80 ntBASIC9.38□□□□□ -0.91
NPIPA3F8WFD2 SMURF2P1-202ENST00000579301 570 ntTSL 5 BASIC9.38□□□□□ -0.91
NPIPA3F8WFD2 MIR4283-1-201ENST00000582960 80 ntBASIC9.38□□□□□ -0.91
NPIPA3F8WFD2 AL357518.1-201ENST00000607169 430 ntBASIC9.38□□□□□ -0.91
NPIPA3F8WFD2 U47924.3-201ENST00000610699 461 ntBASIC9.38□□□□□ -0.91
NPIPA3F8WFD2 MIR6776-201ENST00000616678 59 ntBASIC9.38□□□□□ -0.91
NPIPA3F8WFD2 TPM3-212ENST00000368533 3131 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
NPIPA3F8WFD2 FAM83F-201ENST00000333407 15561 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
NPIPA3F8WFD2 AHSG-202ENST00000411641 1711 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
NPIPA3F8WFD2 ADGRE2-201ENST00000315576 6767 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
NPIPA3F8WFD2 GART-203ENST00000381815 3341 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
NPIPA3F8WFD2 ECE1-202ENST00000357071 3763 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
NPIPA3F8WFD2 HNRNPF-203ENST00000357065 2617 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
NPIPA3F8WFD2 UVSSA-202ENST00000389851 12605 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
NPIPA3F8WFD2 ZNF266-202ENST00000588221 3503 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
NPIPA3F8WFD2 TCTN3-202ENST00000371209 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
NPIPA3F8WFD2 F11-203ENST00000403665 2396 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
NPIPA3F8WFD2 ZMYM3-205ENST00000373984 5253 ntTSL 5 BASIC9.38□□□□□ -0.91
NPIPA3F8WFD2 JADE1-211ENST00000512960 3000 ntAPPRIS P3 TSL 2 BASIC9.38□□□□□ -0.91
NPIPA3F8WFD2 RPE-202ENST00000359429 2569 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
NPIPA3F8WFD2 SMPD4-201ENST00000351288 3661 ntTSL 2 BASIC9.38□□□□□ -0.91
NPIPA3F8WFD2 IGSF9B-201ENST00000321016 4050 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
NPIPA3F8WFD2 INTS9-211ENST00000521022 2544 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
NPIPA3F8WFD2 FCAR-209ENST00000469767 1432 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
NPIPA3F8WFD2 MST1L-202ENST00000455405 3184 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
NPIPA3F8WFD2 EPX-201ENST00000225371 2708 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
NPIPA3F8WFD2 MX1-201ENST00000288383 2733 ntTSL 2 BASIC9.38□□□□□ -0.91
NPIPA3F8WFD2 AC183088.1-201ENST00000626622 3398 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
NPIPA3F8WFD2 COL6A3-201ENST00000295550 10749 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
NPIPA3F8WFD2 SCRN1-201ENST00000242059 5257 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
NPIPA3F8WFD2 CARMN-201ENST00000505254 3950 ntTSL 5 BASIC9.38□□□□□ -0.91
NPIPA3F8WFD2 SLC6A12-203ENST00000424061 3332 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
NPIPA3F8WFD2 XYLB-201ENST00000207870 3664 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
NPIPA3F8WFD2 ABLIM1-204ENST00000369256 3203 ntTSL 5 BASIC9.37□□□□□ -0.91
NPIPA3F8WFD2 ZSCAN30-211ENST00000610712 3439 ntTSL 4 BASIC9.37□□□□□ -0.91
NPIPA3F8WFD2 CHN2-202ENST00000409041 2375 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
NPIPA3F8WFD2 SAMD7-202ENST00000428432 2399 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
NPIPA3F8WFD2 CENPP-202ENST00000375579 2570 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
NPIPA3F8WFD2 ITGB6-211ENST00000620391 4401 ntTSL 3 BASIC9.37□□□□□ -0.91
NPIPA3F8WFD2 SPOCD1-202ENST00000360482 3960 ntAPPRIS P3 TSL 2 BASIC9.37□□□□□ -0.91
NPIPA3F8WFD2 ZNF619-203ENST00000432264 1749 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
NPIPA3F8WFD2 SMAD9-203ENST00000399275 5389 ntAPPRIS ALT1 TSL 1 (best) BASIC9.37□□□□□ -0.91
NPIPA3F8WFD2 STEAP4-203ENST00000414498 2332 ntTSL 2 BASIC9.37□□□□□ -0.91
NPIPA3F8WFD2 TTC12-219ENST00000529221 2315 ntAPPRIS P3 TSL 2 BASIC9.37□□□□□ -0.91
NPIPA3F8WFD2 CD4-201ENST00000011653 3114 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
NPIPA3F8WFD2 ATP8A2-204ENST00000381655 9575 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
NPIPA3F8WFD2 TOP3A-208ENST00000542570 4116 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
NPIPA3F8WFD2 THSD7B-201ENST00000272643 5939 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
NPIPA3F8WFD2 CDHR2-201ENST00000261944 4068 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
NPIPA3F8WFD2 ACTN1-203ENST00000394419 3464 ntAPPRIS ALT1 TSL 1 (best) BASIC9.37□□□□□ -0.91
NPIPA3F8WFD2 TULP3-202ENST00000448120 3076 ntAPPRIS P3 TSL 2 BASIC9.37□□□□□ -0.91
NPIPA3F8WFD2 DPH6-201ENST00000256538 2099 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
NPIPA3F8WFD2 CTCFL-216ENST00000608263 4040 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
NPIPA3F8WFD2 OR2AG1-201ENST00000307401 998 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
NPIPA3F8WFD2 OR10Q1-201ENST00000316770 1037 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
NPIPA3F8WFD2 CD300A-203ENST00000361933 382 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
NPIPA3F8WFD2 AL590559.1-201ENST00000414338 374 ntBASIC9.37□□□□□ -0.91
NPIPA3F8WFD2 AC013469.1-201ENST00000426985 403 ntBASIC9.37□□□□□ -0.91
NPIPA3F8WFD2 LINC01039-201ENST00000437113 650 ntTSL 5 BASIC9.37□□□□□ -0.91
NPIPA3F8WFD2 LINC00370-201ENST00000455487 698 ntTSL 3 BASIC9.37□□□□□ -0.91
NPIPA3F8WFD2 AC092916.2-201ENST00000462510 417 ntBASIC9.37□□□□□ -0.91
NPIPA3F8WFD2 RN7SL116P-201ENST00000470786 305 ntBASIC9.37□□□□□ -0.91
NPIPA3F8WFD2 AC139453.1-201ENST00000504027 895 ntBASIC9.37□□□□□ -0.91
NPIPA3F8WFD2 AC007036.3-201ENST00000511893 614 ntTSL 3 BASIC9.37□□□□□ -0.91
NPIPA3F8WFD2 OR2AT1P-201ENST00000525935 743 ntBASIC9.37□□□□□ -0.91
NPIPA3F8WFD2 TATDN3-207ENST00000526641 1073 ntTSL 2 BASIC9.37□□□□□ -0.91
NPIPA3F8WFD2 LETM2-213ENST00000527710 1261 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
NPIPA3F8WFD2 RRP8-205ENST00000534343 726 ntTSL 2 BASIC9.37□□□□□ -0.91
NPIPA3F8WFD2 PGA5-205ENST00000541528 867 ntTSL 2 BASIC9.37□□□□□ -0.91
NPIPA3F8WFD2 ARHGDIB-206ENST00000541546 859 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
NPIPA3F8WFD2 AC007494.2-201ENST00000563757 764 ntTSL 3 BASIC9.37□□□□□ -0.91
NPIPA3F8WFD2 NDUFB10P2-201ENST00000568872 478 ntBASIC9.37□□□□□ -0.91
NPIPA3F8WFD2 ELOB-205ENST00000572954 331 ntTSL 2 BASIC9.37□□□□□ -0.91
NPIPA3F8WFD2 PROX1-AS1-210ENST00000601854 632 ntTSL 5 BASIC9.37□□□□□ -0.91
NPIPA3F8WFD2 AC091982.3-201ENST00000603996 1115 ntBASIC9.37□□□□□ -0.91
NPIPA3F8WFD2 U47924.2-201ENST00000607421 1097 ntBASIC9.37□□□□□ -0.91
NPIPA3F8WFD2 AC009309.1-201ENST00000610262 460 ntBASIC9.37□□□□□ -0.91
NPIPA3F8WFD2 AC091167.6-201ENST00000610689 413 ntBASIC9.37□□□□□ -0.91
NPIPA3F8WFD2 MIR6760-201ENST00000617342 68 ntBASIC9.37□□□□□ -0.91
NPIPA3F8WFD2 DDX52-213ENST00000617633 6362 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
NPIPA3F8WFD2 MND1-206ENST00000622785 830 ntTSL 2 BASIC9.37□□□□□ -0.91
NPIPA3F8WFD2 AC215522.2-201ENST00000635373 600 ntTSL 3 BASIC9.37□□□□□ -0.91
NPIPA3F8WFD2 RPL23AP49-202ENST00000638439 1138 ntTSL 5 BASIC9.37□□□□□ -0.91
NPIPA3F8WFD2 ADAM10-201ENST00000260408 11431 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
NPIPA3F8WFD2 ENDOU-202ENST00000422538 2413 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
NPIPA3F8WFD2 CADM1-203ENST00000452722 8588 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
NPIPA3F8WFD2 HAVCR1-206ENST00000625904 1807 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 401.3 ms