RNA–Protein interactions for RNA: ENST00000620391.4

ITGB6-211, Transcript of integrin subunit beta 6, humanhuman

TSL 3 BASIC

Gene ITGB6, Length 4,401 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB6-211ENST00000620391 DCAF8L2P0C7V8 631 aa16.48■□□□□ 0.23
ITGB6-211ENST00000620391 SUPT5HO00267 1087 aaKnown RBP16.41■□□□□ 0.22
ITGB6-211ENST00000620391 NISCHQ9Y2I1 1504 aa16.4■□□□□ 0.22
ITGB6-211ENST00000620391 PELP1Q8IZL8 1130 aaKnown RBP16.24■□□□□ 0.19
ITGB6-211ENST00000620391 MYT1Q01538 1121 aa16.03■□□□□ 0.16
ITGB6-211ENST00000620391 PCGF6Q9BYE7 350 aa15.96■□□□□ 0.15
ITGB6-211ENST00000620391 SHROOM4Q9ULL8 1493 aa15.94■□□□□ 0.14
ITGB6-211ENST00000620391 ZEB1P37275 1124 aaPredicted RBP15.85■□□□□ 0.13
ITGB6-211ENST00000620391 CENPBP07199 599 aaPredicted RBP15.82■□□□□ 0.12
ITGB6-211ENST00000620391 HRCP23327 699 aa15.61■□□□□ 0.09
ITGB6-211ENST00000620391 EHMT2Q96KQ7 1210 aa15.59■□□□□ 0.09
ITGB6-211ENST00000620391 APLP2Q06481 763 aa15.45■□□□□ 0.06
ITGB6-211ENST00000620391 CCER1Q8TC90 406 aaPredicted RBP15.44■□□□□ 0.06
ITGB6-211ENST00000620391 ERICH6Q7L0X2 663 aa15.4■□□□□ 0.06
ITGB6-211ENST00000620391 FAM9AQ8IZU1 332 aaPredicted RBP15.39■□□□□ 0.05
ITGB6-211ENST00000620391 TRIM26Q12899 539 aaPredicted RBP15.33■□□□□ 0.04
ITGB6-211ENST00000620391 TRIM41Q8WV44 630 aa15.23■□□□□ 0.03
ITGB6-211ENST00000620391 TTBK1Q5TCY1 1321 aaPredicted RBP15.2■□□□□ 0.02
ITGB6-211ENST00000620391 YTHDC1Q96MU7 727 aaKnown RBP15.18■□□□□ 0.02
ITGB6-211ENST00000620391 NEFLP07196 543 aa15.17■□□□□ 0.02
ITGB6-211ENST00000620391 PPARGC1BQ86YN6 1023 aaKnown RBP15.11■□□□□ 0.01
ITGB6-211ENST00000620391 CHIC1Q5VXU3 224 aa15.03■□□□□ -0
ITGB6-211ENST00000620391 LOC105371045A0A1W2PR82 267 aa14.89□□□□□ -0.03
ITGB6-211ENST00000620391 UBTFP17480 764 aaKnown RBP14.89□□□□□ -0.03
ITGB6-211ENST00000620391 DIEXFQ68CQ4 756 aaKnown RBP14.87□□□□□ -0.03
ITGB6-211ENST00000620391 GTF3C3Q9Y5Q9 886 aa14.8□□□□□ -0.04
ITGB6-211ENST00000620391 RANGAP1P46060 587 aaPredicted RBP14.76□□□□□ -0.05
ITGB6-211ENST00000620391 ACIN1Q9UKV3 1341 aaKnown RBP14.71□□□□□ -0.05
ITGB6-211ENST00000620391 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.69□□□□□ -0.06
ITGB6-211ENST00000620391 DAXXQ9UER7 740 aaPredicted RBP14.58□□□□□ -0.08
ITGB6-211ENST00000620391 HNRNPUL2Q1KMD3 747 aaKnown RBP14.58□□□□□ -0.08
ITGB6-211ENST00000620391 RTL5Q5HYW3 569 aaPredicted RBP14.58□□□□□ -0.08
ITGB6-211ENST00000620391 ATP1B4Q9UN42 357 aaPredicted RBP14.56□□□□□ -0.08
ITGB6-211ENST00000620391 ZNF316A6NFI3 1004 aaPredicted RBP14.49□□□□□ -0.09
ITGB6-211ENST00000620391 CLSPNQ9HAW4 1339 aa14.45□□□□□ -0.1
ITGB6-211ENST00000620391 ITGAEP38570 1179 aa14.4□□□□□ -0.1
ITGB6-211ENST00000620391 SCAF1Q9H7N4 1312 aaKnown RBP14.4□□□□□ -0.1
ITGB6-211ENST00000620391 CDK11AQ9UQ88 783 aaPredicted RBP14.38□□□□□ -0.11
ITGB6-211ENST00000620391 BCANQ96GW7 911 aa14.37□□□□□ -0.11
ITGB6-211ENST00000620391 DCAF1Q9Y4B6 1507 aa14.37□□□□□ -0.11
ITGB6-211ENST00000620391 NEUROD1Q13562 356 aa14.33□□□□□ -0.12
ITGB6-211ENST00000620391 ANP32CO43423 234 aa14.25□□□□□ -0.13
ITGB6-211ENST00000620391 MYT1LQ9UL68 1186 aa14.25□□□□□ -0.13
ITGB6-211ENST00000620391 POLR3GLQ9BT43 218 aa14.23□□□□□ -0.13
ITGB6-211ENST00000620391 ANP32AP39687 249 aaKnown RBP14.12□□□□□ -0.15
ITGB6-211ENST00000620391 CNGB1Q14028 1251 aaPredicted RBP14.11□□□□□ -0.15
ITGB6-211ENST00000620391 FKBP8Q14318 412 aa14.1□□□□□ -0.15
ITGB6-211ENST00000620391 FAM50AQ14320 339 aaKnown RBP14.04□□□□□ -0.16
ITGB6-211ENST00000620391 ANP32EQ9BTT0 268 aa14.02□□□□□ -0.16
ITGB6-211ENST00000620391 EIF5BO60841 1220 aaKnown RBP13.98□□□□□ -0.17
ITGB6-211ENST00000620391 MIER1Q8N108 512 aa13.97□□□□□ -0.17
ITGB6-211ENST00000620391 CSRNP3Q8WYN3 585 aa13.95□□□□□ -0.18
ITGB6-211ENST00000620391 GLIPR1L2Q4G1C9 344 aa13.93□□□□□ -0.18
ITGB6-211ENST00000620391 TRIM52Q96A61 297 aa13.92□□□□□ -0.18
ITGB6-211ENST00000620391 HNRNPUQ00839 825 aaKnown RBP eCLIP13.87□□□□□ -0.19
ITGB6-211ENST00000620391 ZBTB47Q9UFB7 747 aaPredicted RBP13.87□□□□□ -0.19
ITGB6-211ENST00000620391 NPM2Q86SE8 214 aaKnown RBP13.86□□□□□ -0.19
ITGB6-211ENST00000620391 CCDC180Q9P1Z9 1646 aa13.86□□□□□ -0.19
ITGB6-211ENST00000620391 MYO15BQ96JP2 1530 aa13.86□□□□□ -0.19
ITGB6-211ENST00000620391 DDX10Q13206 875 aaKnown RBP13.85□□□□□ -0.19
ITGB6-211ENST00000620391 NBR1Q14596 966 aa13.82□□□□□ -0.2
ITGB6-211ENST00000620391 BCL11AQ9H165 835 aa13.78□□□□□ -0.2
ITGB6-211ENST00000620391 CCDC136Q96JN2 1154 aa13.77□□□□□ -0.21
ITGB6-211ENST00000620391 TONSLQ96HA7 1378 aa13.75□□□□□ -0.21
ITGB6-211ENST00000620391 ZNF326Q5BKZ1 582 aaKnown RBP13.73□□□□□ -0.21
ITGB6-211ENST00000620391 ANP32BQ92688 251 aaKnown RBP13.71□□□□□ -0.21
ITGB6-211ENST00000620391 SUPT16HQ9Y5B9 1047 aaKnown RBP13.71□□□□□ -0.21
ITGB6-211ENST00000620391 SLC4A1APQ9BWU0 796 aaKnown RBP13.7□□□□□ -0.22
ITGB6-211ENST00000620391 CANXP27824 592 aaKnown RBP13.7□□□□□ -0.22
ITGB6-211ENST00000620391 FAM9BQ8IZU0 186 aa13.7□□□□□ -0.22
ITGB6-211ENST00000620391 ZCCHC6Q5VYS8 1495 aaKnown RBP13.68□□□□□ -0.22
ITGB6-211ENST00000620391 UPF2Q9HAU5 1272 aaKnown RBP13.66□□□□□ -0.22
ITGB6-211ENST00000620391 IRX6P78412 446 aaPredicted RBP13.62□□□□□ -0.23
ITGB6-211ENST00000620391 MRS2Q9HD23 443 aa13.62□□□□□ -0.23
ITGB6-211ENST00000620391 DDRGK1Q96HY6 314 aa13.59□□□□□ -0.23
ITGB6-211ENST00000620391 PPM1GO15355 546 aaPredicted RBP13.58□□□□□ -0.24
ITGB6-211ENST00000620391 TMC1Q8TDI8 760 aa13.58□□□□□ -0.24
ITGB6-211ENST00000620391 ERICH6BQ5W0A0 696 aa13.55□□□□□ -0.24
ITGB6-211ENST00000620391 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.55□□□□□ -0.24
ITGB6-211ENST00000620391 PPP4R2Q9NY27 417 aa13.55□□□□□ -0.24
ITGB6-211ENST00000620391 HSP90AA1P07900 732 aaKnown RBP13.55□□□□□ -0.24
ITGB6-211ENST00000620391 NOP58Q9Y2X3 529 aaKnown RBP13.54□□□□□ -0.24
ITGB6-211ENST00000620391 RBM19Q9Y4C8 960 aaKnown RBP13.54□□□□□ -0.24
ITGB6-211ENST00000620391 NEFMP07197 916 aa13.54□□□□□ -0.24
ITGB6-211ENST00000620391 CLIP1P30622 1438 aa13.51□□□□□ -0.25
ITGB6-211ENST00000620391 CEP162Q5TB80 1403 aa13.51□□□□□ -0.25
ITGB6-211ENST00000620391 P3H3Q8IVL6 736 aa13.5□□□□□ -0.25
ITGB6-211ENST00000620391 DEKP35659 375 aaKnown RBP13.5□□□□□ -0.25
ITGB6-211ENST00000620391 EEA1Q15075 1411 aa13.5□□□□□ -0.25
ITGB6-211ENST00000620391 EIF4G2P78344 907 aaKnown RBP eCLIP13.49□□□□□ -0.25
ITGB6-211ENST00000620391 TSHZ2Q9NRE2 1034 aa13.48□□□□□ -0.25
ITGB6-211ENST00000620391 HIRIP3Q9BW71 556 aaPredicted RBP13.47□□□□□ -0.25
ITGB6-211ENST00000620391 SALL2Q9Y467 1007 aaPredicted RBP13.46□□□□□ -0.25
ITGB6-211ENST00000620391 BECN1Q14457 450 aa13.46□□□□□ -0.25
ITGB6-211ENST00000620391 TNIKQ9UKE5 1360 aa13.44□□□□□ -0.26
ITGB6-211ENST00000620391 ARXQ96QS3 562 aa13.44□□□□□ -0.26
ITGB6-211ENST00000620391 TRIM44Q96DX7 344 aaPredicted RBP13.43□□□□□ -0.26
ITGB6-211ENST00000620391 RTN4Q9NQC3 1192 aaKnown RBP13.43□□□□□ -0.26
ITGB6-211ENST00000620391 PABPN1Q86U42 306 aaKnown RBP eCLIP13.42□□□□□ -0.26
ITGB6-211ENST00000620391 CCER2I3L3R5 266 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 141.3 ms