RNA–Protein interactions for RNA: ENST00000608263.5

CTCFL-216, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 4,040 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-216ENST00000608263 NISCHQ9Y2I1 1504 aa18.96■□□□□ 0.63
CTCFL-216ENST00000608263 DCAF8L2P0C7V8 631 aa18.75■□□□□ 0.59
CTCFL-216ENST00000608263 SUPT5HO00267 1087 aaKnown RBP17.84■□□□□ 0.45
CTCFL-216ENST00000608263 SHROOM4Q9ULL8 1493 aa17.83■□□□□ 0.44
CTCFL-216ENST00000608263 EHMT2Q96KQ7 1210 aa17.02■□□□□ 0.32
CTCFL-216ENST00000608263 PCGF6Q9BYE7 350 aa17■□□□□ 0.31
CTCFL-216ENST00000608263 FAM9AQ8IZU1 332 aaPredicted RBP16.72■□□□□ 0.27
CTCFL-216ENST00000608263 CHIC1Q5VXU3 224 aa16.6■□□□□ 0.25
CTCFL-216ENST00000608263 LOC105371045A0A1W2PR82 267 aa16.56■□□□□ 0.24
CTCFL-216ENST00000608263 PPARGC1BQ86YN6 1023 aaKnown RBP16.54■□□□□ 0.24
CTCFL-216ENST00000608263 HRCP23327 699 aa16.52■□□□□ 0.24
CTCFL-216ENST00000608263 TTBK1Q5TCY1 1321 aaPredicted RBP16.44■□□□□ 0.22
CTCFL-216ENST00000608263 TRIM41Q8WV44 630 aa16.34■□□□□ 0.21
CTCFL-216ENST00000608263 ABCC9O60706 1549 aa16.3■□□□□ 0.2
CTCFL-216ENST00000608263 RANGAP1P46060 587 aaPredicted RBP16.23■□□□□ 0.19
CTCFL-216ENST00000608263 TRIM26Q12899 539 aaPredicted RBP16.17■□□□□ 0.18
CTCFL-216ENST00000608263 PABPN1Q86U42 306 aaKnown RBP eCLIP16.15■□□□□ 0.18
CTCFL-216ENST00000608263 CCER1Q8TC90 406 aaPredicted RBP16.06■□□□□ 0.16
CTCFL-216ENST00000608263 MYO15BQ96JP2 1530 aa16.03■□□□□ 0.16
CTCFL-216ENST00000608263 ZEB1P37275 1124 aaPredicted RBP16.01■□□□□ 0.15
CTCFL-216ENST00000608263 CCDC180Q9P1Z9 1646 aa15.97■□□□□ 0.15
CTCFL-216ENST00000608263 ZCCHC6Q5VYS8 1495 aaKnown RBP15.87■□□□□ 0.13
CTCFL-216ENST00000608263 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.87■□□□□ 0.13
CTCFL-216ENST00000608263 ATP1B4Q9UN42 357 aaPredicted RBP15.86■□□□□ 0.13
CTCFL-216ENST00000608263 UBTFP17480 764 aaKnown RBP15.85■□□□□ 0.13
CTCFL-216ENST00000608263 APLP2Q06481 763 aa15.84■□□□□ 0.13
CTCFL-216ENST00000608263 YTHDC1Q96MU7 727 aaKnown RBP15.83■□□□□ 0.12
CTCFL-216ENST00000608263 PELP1Q8IZL8 1130 aaKnown RBP15.76■□□□□ 0.11
CTCFL-216ENST00000608263 CENPBP07199 599 aaPredicted RBP15.72■□□□□ 0.11
CTCFL-216ENST00000608263 HNRNPUL2Q1KMD3 747 aaKnown RBP15.62■□□□□ 0.09
CTCFL-216ENST00000608263 DCAF1Q9Y4B6 1507 aa15.57■□□□□ 0.08
CTCFL-216ENST00000608263 DIEXFQ68CQ4 756 aaKnown RBP15.55■□□□□ 0.08
CTCFL-216ENST00000608263 GTF3C3Q9Y5Q9 886 aa15.44■□□□□ 0.06
CTCFL-216ENST00000608263 SCRIBQ14160 1630 aa15.44■□□□□ 0.06
CTCFL-216ENST00000608263 ITGAEP38570 1179 aa15.43■□□□□ 0.06
CTCFL-216ENST00000608263 SCAF1Q9H7N4 1312 aaKnown RBP15.4■□□□□ 0.06
CTCFL-216ENST00000608263 RSF1Q96T23 1441 aaPredicted RBP15.32■□□□□ 0.04
CTCFL-216ENST00000608263 ACIN1Q9UKV3 1341 aaKnown RBP15.32■□□□□ 0.04
CTCFL-216ENST00000608263 NEUROD1Q13562 356 aa15.31■□□□□ 0.04
CTCFL-216ENST00000608263 MYT1Q01538 1121 aa15.29■□□□□ 0.04
CTCFL-216ENST00000608263 FBLN2P98095 1184 aa15.27■□□□□ 0.03
CTCFL-216ENST00000608263 CSRNP3Q8WYN3 585 aa15.21■□□□□ 0.03
CTCFL-216ENST00000608263 ZNF316A6NFI3 1004 aaPredicted RBP15.21■□□□□ 0.02
CTCFL-216ENST00000608263 MYT1LQ9UL68 1186 aa15.19■□□□□ 0.02
CTCFL-216ENST00000608263 CECR2Q9BXF3 1484 aa15.1■□□□□ 0.01
CTCFL-216ENST00000608263 ARID3CA6NKF2 412 aa15.08■□□□□ 0.01
CTCFL-216ENST00000608263 RB1CC1Q8TDY2 1594 aa15.08■□□□□ 0
CTCFL-216ENST00000608263 NACADO15069 1562 aa15.07■□□□□ 0
CTCFL-216ENST00000608263 P3H3Q8IVL6 736 aa15.05■□□□□ -0
CTCFL-216ENST00000608263 BCANQ96GW7 911 aa15.04■□□□□ -0
CTCFL-216ENST00000608263 MIER1Q8N108 512 aa15.03■□□□□ -0
CTCFL-216ENST00000608263 NEFLP07196 543 aa14.98□□□□□ -0.01
CTCFL-216ENST00000608263 CNGB1Q14028 1251 aaPredicted RBP14.97□□□□□ -0.01
CTCFL-216ENST00000608263 FAM50AQ14320 339 aaKnown RBP14.96□□□□□ -0.01
CTCFL-216ENST00000608263 CEP162Q5TB80 1403 aa14.94□□□□□ -0.02
CTCFL-216ENST00000608263 MROH2BQ7Z745 1585 aa14.89□□□□□ -0.03
CTCFL-216ENST00000608263 SOGA1O94964 1423 aa14.88□□□□□ -0.03
CTCFL-216ENST00000608263 ERICH6Q7L0X2 663 aa14.85□□□□□ -0.03
CTCFL-216ENST00000608263 POLR3GLQ9BT43 218 aa14.82□□□□□ -0.04
CTCFL-216ENST00000608263 ABCC8Q09428 1581 aa14.81□□□□□ -0.04
CTCFL-216ENST00000608263 CCDC88BA6NC98 1476 aa14.79□□□□□ -0.04
CTCFL-216ENST00000608263 HIRIP3Q9BW71 556 aaPredicted RBP14.79□□□□□ -0.04
CTCFL-216ENST00000608263 CLIP1P30622 1438 aa14.78□□□□□ -0.04
CTCFL-216ENST00000608263 DDX10Q13206 875 aaKnown RBP14.76□□□□□ -0.05
CTCFL-216ENST00000608263 TNIKQ9UKE5 1360 aa14.75□□□□□ -0.05
CTCFL-216ENST00000608263 WIZO95785 1651 aa14.74□□□□□ -0.05
CTCFL-216ENST00000608263 WRNQ14191 1432 aaPredicted RBP eCLIP14.69□□□□□ -0.06
CTCFL-216ENST00000608263 GOLGA3Q08378 1498 aa14.69□□□□□ -0.06
CTCFL-216ENST00000608263 FKBP8Q14318 412 aa14.68□□□□□ -0.06
CTCFL-216ENST00000608263 TRIM52Q96A61 297 aa14.67□□□□□ -0.06
CTCFL-216ENST00000608263 ZNF777Q9ULD5 760 aaPredicted RBP14.67□□□□□ -0.06
CTCFL-216ENST00000608263 RUSC2Q8N2Y8 1516 aa14.66□□□□□ -0.06
CTCFL-216ENST00000608263 ANP32CO43423 234 aa14.65□□□□□ -0.06
CTCFL-216ENST00000608263 BAZ1AQ9NRL2 1556 aaPredicted RBP14.62□□□□□ -0.07
CTCFL-216ENST00000608263 CHMP7Q8WUX9 453 aaPredicted RBP14.59□□□□□ -0.07
CTCFL-216ENST00000608263 EEA1Q15075 1411 aa14.59□□□□□ -0.07
CTCFL-216ENST00000608263 KANK4Q5T7N3 995 aaPredicted RBP14.58□□□□□ -0.08
CTCFL-216ENST00000608263 PLPPR3Q6T4P5 718 aa14.57□□□□□ -0.08
CTCFL-216ENST00000608263 BAZ1BQ9UIG0 1483 aaKnown RBP14.57□□□□□ -0.08
CTCFL-216ENST00000608263 SIN3AQ96ST3 1273 aa14.56□□□□□ -0.08
CTCFL-216ENST00000608263 ZNF326Q5BKZ1 582 aaKnown RBP14.55□□□□□ -0.08
CTCFL-216ENST00000608263 IRX6P78412 446 aaPredicted RBP14.54□□□□□ -0.08
CTCFL-216ENST00000608263 CEP164Q9UPV0 1460 aa14.53□□□□□ -0.08
CTCFL-216ENST00000608263 SLC4A1APQ9BWU0 796 aaKnown RBP14.53□□□□□ -0.08
CTCFL-216ENST00000608263 UNC13AQ9UPW8 1703 aa14.53□□□□□ -0.08
CTCFL-216ENST00000608263 SUPT16HQ9Y5B9 1047 aaKnown RBP14.5□□□□□ -0.09
CTCFL-216ENST00000608263 CHIC2Q9UKJ5 165 aa14.5□□□□□ -0.09
CTCFL-216ENST00000608263 HNRNPUQ00839 825 aaKnown RBP eCLIP14.49□□□□□ -0.09
CTCFL-216ENST00000608263 KCNH8Q96L42 1107 aa14.47□□□□□ -0.09
CTCFL-216ENST00000608263 SENP3-EIF4A1A0A087X0R7 540 aa14.46□□□□□ -0.1
CTCFL-216ENST00000608263 BICRAQ9NZM4 1560 aa14.46□□□□□ -0.1
CTCFL-216ENST00000608263 VPS8Q8N3P4 1428 aa14.45□□□□□ -0.1
CTCFL-216ENST00000608263 TONSLQ96HA7 1378 aa14.44□□□□□ -0.1
CTCFL-216ENST00000608263 NPM1P06748 294 aaKnown RBP eCLIP14.43□□□□□ -0.1
CTCFL-216ENST00000608263 ERCC6Q03468 1493 aa14.42□□□□□ -0.1
CTCFL-216ENST00000608263 FAM9BQ8IZU0 186 aa14.42□□□□□ -0.1
CTCFL-216ENST00000608263 CDK11AQ9UQ88 783 aaPredicted RBP14.41□□□□□ -0.1
CTCFL-216ENST00000608263 RAPGEF2Q9Y4G8 1499 aa14.4□□□□□ -0.1
CTCFL-216ENST00000608263 TOP2AP11388 1531 aaKnown RBP14.39□□□□□ -0.11
CTCFL-216ENST00000608263 RRP7BPQ9NSQ0 103 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms