RNA–Protein interactions for RNA: ENST00000617633.4

DDX52-213, Transcript of DExD-box helicase 52, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX52, Length 6,362 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX52-213ENST00000617633 NISCHQ9Y2I1 1504 aa17.7■□□□□ 0.42
DDX52-213ENST00000617633 DCAF8L2P0C7V8 631 aa17.63■□□□□ 0.41
DDX52-213ENST00000617633 FAM9AQ8IZU1 332 aaPredicted RBP16.45■□□□□ 0.22
DDX52-213ENST00000617633 ABCC9O60706 1549 aa15.78■□□□□ 0.12
DDX52-213ENST00000617633 SHROOM4Q9ULL8 1493 aa15.74■□□□□ 0.11
DDX52-213ENST00000617633 SUPT5HO00267 1087 aaKnown RBP15.68■□□□□ 0.1
DDX52-213ENST00000617633 APLP2Q06481 763 aa15.5■□□□□ 0.07
DDX52-213ENST00000617633 CCDC180Q9P1Z9 1646 aa15.42■□□□□ 0.06
DDX52-213ENST00000617633 RB1CC1Q8TDY2 1594 aa15.24■□□□□ 0.03
DDX52-213ENST00000617633 PABPN1Q86U42 306 aaKnown RBP eCLIP15.24■□□□□ 0.03
DDX52-213ENST00000617633 ATP1B4Q9UN42 357 aaPredicted RBP15.02■□□□□ -0
DDX52-213ENST00000617633 MYT1LQ9UL68 1186 aa15.01□□□□□ -0.01
DDX52-213ENST00000617633 NACADO15069 1562 aa14.98□□□□□ -0.01
DDX52-213ENST00000617633 TRIM41Q8WV44 630 aa14.93□□□□□ -0.02
DDX52-213ENST00000617633 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.88□□□□□ -0.03
DDX52-213ENST00000617633 HNRNPUL2Q1KMD3 747 aaKnown RBP14.88□□□□□ -0.03
DDX52-213ENST00000617633 EHMT2Q96KQ7 1210 aa14.82□□□□□ -0.04
DDX52-213ENST00000617633 UBTFP17480 764 aaKnown RBP14.82□□□□□ -0.04
DDX52-213ENST00000617633 SCRIBQ14160 1630 aa14.81□□□□□ -0.04
DDX52-213ENST00000617633 NPM1P06748 294 aaKnown RBP eCLIP14.74□□□□□ -0.05
DDX52-213ENST00000617633 FBLN2P98095 1184 aa14.74□□□□□ -0.05
DDX52-213ENST00000617633 RANGAP1P46060 587 aaPredicted RBP14.73□□□□□ -0.05
DDX52-213ENST00000617633 TTBK1Q5TCY1 1321 aaPredicted RBP14.71□□□□□ -0.05
DDX52-213ENST00000617633 ERCC6Q03468 1493 aa14.67□□□□□ -0.06
DDX52-213ENST00000617633 ZCCHC6Q5VYS8 1495 aaKnown RBP14.57□□□□□ -0.08
DDX52-213ENST00000617633 ESF1Q9H501 851 aaKnown RBP14.53□□□□□ -0.08
DDX52-213ENST00000617633 CDK11AQ9UQ88 783 aaPredicted RBP14.4□□□□□ -0.1
DDX52-213ENST00000617633 BAZ1BQ9UIG0 1483 aaKnown RBP14.37□□□□□ -0.11
DDX52-213ENST00000617633 CHMP7Q8WUX9 453 aaPredicted RBP14.37□□□□□ -0.11
DDX52-213ENST00000617633 DCAF1Q9Y4B6 1507 aa14.34□□□□□ -0.11
DDX52-213ENST00000617633 PDS5BQ9NTI5 1447 aa14.25□□□□□ -0.13
DDX52-213ENST00000617633 MYO15BQ96JP2 1530 aa14.24□□□□□ -0.13
DDX52-213ENST00000617633 SMARCA2P51531 1590 aa14.23□□□□□ -0.13
DDX52-213ENST00000617633 CHIC1Q5VXU3 224 aa14.23□□□□□ -0.13
DDX52-213ENST00000617633 BCANQ96GW7 911 aa14.19□□□□□ -0.14
DDX52-213ENST00000617633 CECR2Q9BXF3 1484 aa14.19□□□□□ -0.14
DDX52-213ENST00000617633 BAZ1AQ9NRL2 1556 aaPredicted RBP14.17□□□□□ -0.14
DDX52-213ENST00000617633 TRHP20396 242 aaPredicted RBP14.17□□□□□ -0.14
DDX52-213ENST00000617633 STAG3Q9UJ98 1225 aa14.08□□□□□ -0.16
DDX52-213ENST00000617633 PELP1Q8IZL8 1130 aaKnown RBP14.07□□□□□ -0.16
DDX52-213ENST00000617633 AEBP2Q6ZN18 517 aaPredicted RBP14.04□□□□□ -0.16
DDX52-213ENST00000617633 SLC4A1APQ9BWU0 796 aaKnown RBP13.98□□□□□ -0.17
DDX52-213ENST00000617633 FAM50AQ14320 339 aaKnown RBP13.96□□□□□ -0.17
DDX52-213ENST00000617633 ARID4BQ4LE39 1312 aaPredicted RBP13.95□□□□□ -0.18
DDX52-213ENST00000617633 TRIM52Q96A61 297 aa13.94□□□□□ -0.18
DDX52-213ENST00000617633 ZEB1P37275 1124 aaPredicted RBP13.93□□□□□ -0.18
DDX52-213ENST00000617633 ITGAEP38570 1179 aa13.92□□□□□ -0.18
DDX52-213ENST00000617633 ABCC8Q09428 1581 aa13.91□□□□□ -0.18
DDX52-213ENST00000617633 ZNF777Q9ULD5 760 aaPredicted RBP13.9□□□□□ -0.18
DDX52-213ENST00000617633 PLPPR3Q6T4P5 718 aa13.89□□□□□ -0.19
DDX52-213ENST00000617633 ACIN1Q9UKV3 1341 aaKnown RBP13.88□□□□□ -0.19
DDX52-213ENST00000617633 CEP164Q9UPV0 1460 aa13.88□□□□□ -0.19
DDX52-213ENST00000617633 CCER1Q8TC90 406 aaPredicted RBP13.87□□□□□ -0.19
DDX52-213ENST00000617633 CSRNP3Q8WYN3 585 aa13.87□□□□□ -0.19
DDX52-213ENST00000617633 PLEKHD1A6NEE1 506 aa13.86□□□□□ -0.19
DDX52-213ENST00000617633 CARMIL2Q6F5E8 1435 aa13.85□□□□□ -0.19
DDX52-213ENST00000617633 KIF27Q86VH2 1401 aa13.83□□□□□ -0.19
DDX52-213ENST00000617633 OSCARQ8IYS5 282 aa13.83□□□□□ -0.19
DDX52-213ENST00000617633 WRNQ14191 1432 aaPredicted RBP eCLIP13.83□□□□□ -0.2
DDX52-213ENST00000617633 P3H3Q8IVL6 736 aa13.82□□□□□ -0.2
DDX52-213ENST00000617633 TSPY4P0CV99 314 aa13.79□□□□□ -0.2
DDX52-213ENST00000617633 TSPY10P0CW01 314 aa13.79□□□□□ -0.2
DDX52-213ENST00000617633 PCGF6Q9BYE7 350 aa13.79□□□□□ -0.2
DDX52-213ENST00000617633 RSF1Q96T23 1441 aaPredicted RBP13.79□□□□□ -0.2
DDX52-213ENST00000617633 ARID3CA6NKF2 412 aa13.78□□□□□ -0.2
DDX52-213ENST00000617633 EEA1Q15075 1411 aa13.76□□□□□ -0.21
DDX52-213ENST00000617633 CADPSQ9ULU8 1353 aa13.75□□□□□ -0.21
DDX52-213ENST00000617633 NEFMP07197 916 aa13.75□□□□□ -0.21
DDX52-213ENST00000617633 HDGFP51858 240 aaKnown RBP13.75□□□□□ -0.21
DDX52-213ENST00000617633 KCNH8Q96L42 1107 aa13.73□□□□□ -0.21
DDX52-213ENST00000617633 POLR3GLQ9BT43 218 aa13.73□□□□□ -0.21
DDX52-213ENST00000617633 PPP1R15AO75807 674 aaPredicted RBP13.71□□□□□ -0.21
DDX52-213ENST00000617633 CLIP1P30622 1438 aa13.71□□□□□ -0.21
DDX52-213ENST00000617633 CHGAP10645 457 aaKnown RBP13.71□□□□□ -0.22
DDX52-213ENST00000617633 C14orf37Q86TY3 774 aa13.68□□□□□ -0.22
DDX52-213ENST00000617633 SOGA1O94964 1423 aa13.68□□□□□ -0.22
DDX52-213ENST00000617633 EIF4G1Q04637 1599 aaKnown RBP13.67□□□□□ -0.22
DDX52-213ENST00000617633 MTUS2Q5JR59 1369 aa13.65□□□□□ -0.22
DDX52-213ENST00000617633 ATAD2BQ9ULI0 1458 aa13.64□□□□□ -0.23
DDX52-213ENST00000617633 TOP2AP11388 1531 aaKnown RBP13.63□□□□□ -0.23
DDX52-213ENST00000617633 SMARCA4P51532 1647 aa13.63□□□□□ -0.23
DDX52-213ENST00000617633 HAP1P54257 671 aaPredicted RBP13.61□□□□□ -0.23
DDX52-213ENST00000617633 CC2D2AQ9P2K1 1620 aa13.6□□□□□ -0.23
DDX52-213ENST00000617633 KANK1Q14678 1352 aa13.6□□□□□ -0.23
DDX52-213ENST00000617633 FANCD2Q9BXW9 1451 aa13.6□□□□□ -0.23
DDX52-213ENST00000617633 CUX2O14529 1486 aa13.58□□□□□ -0.24
DDX52-213ENST00000617633 MRC2Q9UBG0 1479 aa13.56□□□□□ -0.24
DDX52-213ENST00000617633 ZNF326Q5BKZ1 582 aaKnown RBP13.56□□□□□ -0.24
DDX52-213ENST00000617633 GOLGA3Q08378 1498 aa13.56□□□□□ -0.24
DDX52-213ENST00000617633 NCAPD3P42695 1498 aa13.55□□□□□ -0.24
DDX52-213ENST00000617633 SCAF1Q9H7N4 1312 aaKnown RBP13.54□□□□□ -0.24
DDX52-213ENST00000617633 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.52□□□□□ -0.253e-6■□□□□ 8.8
DDX52-213ENST00000617633 FOXD1Q16676 465 aa13.51□□□□□ -0.25
DDX52-213ENST00000617633 TRIM26Q12899 539 aaPredicted RBP13.51□□□□□ -0.25
DDX52-213ENST00000617633 CARMIL1Q5VZK9 1371 aa13.5□□□□□ -0.25
DDX52-213ENST00000617633 FHAD1B1AJZ9 1412 aa13.47□□□□□ -0.25
DDX52-213ENST00000617633 SLC24A1O60721 1099 aa13.47□□□□□ -0.25
DDX52-213ENST00000617633 CFDP1Q9UEE9 299 aaPredicted RBP13.47□□□□□ -0.25
DDX52-213ENST00000617633 CYB5RLQ6IPT4 315 aa13.47□□□□□ -0.25
DDX52-213ENST00000617633 IFT140Q96RY7 1462 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 140.1 ms