RNA–Protein interactions for RNA: ENST00000638439.1

RPL23AP49-202, Transcript of ribosomal protein L23a pseudogene 49, humanhuman

TSL 5 BASIC

Gene RPL23AP49, Length 1,138 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL23AP49-202ENST00000638439 AEBP2Q6ZN18 517 aaPredicted RBP31.02■■■□□ 2.56
RPL23AP49-202ENST00000638439 CHIC1Q5VXU3 224 aa29.36■■■□□ 2.29
RPL23AP49-202ENST00000638439 SENP3Q9H4L4 574 aaPredicted RBP26.23■■□□□ 1.79
RPL23AP49-202ENST00000638439 PHF23Q9BUL5 403 aaPredicted RBP26.01■■□□□ 1.75
RPL23AP49-202ENST00000638439 NISCHQ9Y2I1 1504 aa24.72■■□□□ 1.55
RPL23AP49-202ENST00000638439 FOXD1Q16676 465 aa24.6■■□□□ 1.53
RPL23AP49-202ENST00000638439 PLPPR3Q6T4P5 718 aa23.38■■□□□ 1.33
RPL23AP49-202ENST00000638439 POTEDQ86YR6 584 aa23.34■■□□□ 1.33
RPL23AP49-202ENST00000638439 PPP6R1Q9UPN7 881 aa23.11■■□□□ 1.29
RPL23AP49-202ENST00000638439 ADRA2BP18089 450 aa22.98■■□□□ 1.27
RPL23AP49-202ENST00000638439 MSH5O43196 834 aa22.96■■□□□ 1.27
RPL23AP49-202ENST00000638439 PIAS4Q8N2W9 510 aaPredicted RBP22.89■■□□□ 1.25
RPL23AP49-202ENST00000638439 CCDC180Q9P1Z9 1646 aa21.88■■□□□ 1.09
RPL23AP49-202ENST00000638439 ABCC9O60706 1549 aa21.3■■□□□ 1
RPL23AP49-202ENST00000638439 MAPK8IP2Q13387 824 aaPredicted RBP21.15■□□□□ 0.98
RPL23AP49-202ENST00000638439 DMRT2Q9Y5R5 561 aa20.87■□□□□ 0.93
RPL23AP49-202ENST00000638439 SCAF1Q9H7N4 1312 aaKnown RBP20.78■□□□□ 0.92
RPL23AP49-202ENST00000638439 DCAF8L2P0C7V8 631 aa20.66■□□□□ 0.9
RPL23AP49-202ENST00000638439 ZCCHC6Q5VYS8 1495 aaKnown RBP20.62■□□□□ 0.89
RPL23AP49-202ENST00000638439 PPP4R3CPQ6ZMV5 832 aa20.58■□□□□ 0.89
RPL23AP49-202ENST00000638439 NACADO15069 1562 aa20.55■□□□□ 0.88
RPL23AP49-202ENST00000638439 RB1CC1Q8TDY2 1594 aa20.55■□□□□ 0.88
RPL23AP49-202ENST00000638439 MYO15BQ96JP2 1530 aa20.48■□□□□ 0.87
RPL23AP49-202ENST00000638439 DCAF1Q9Y4B6 1507 aa20.45■□□□□ 0.86
RPL23AP49-202ENST00000638439 HOXD11P31277 338 aaPredicted RBP20.13■□□□□ 0.81
RPL23AP49-202ENST00000638439 CNKSR2Q8WXI2 1034 aa20.12■□□□□ 0.81
RPL23AP49-202ENST00000638439 CACNB1Q02641 598 aaPredicted RBP20.07■□□□□ 0.8
RPL23AP49-202ENST00000638439 UNC13AQ9UPW8 1703 aa20.06■□□□□ 0.8
RPL23AP49-202ENST00000638439 SCRIBQ14160 1630 aa20.01■□□□□ 0.79
RPL23AP49-202ENST00000638439 PABPN1Q86U42 306 aaKnown RBP eCLIP19.97■□□□□ 0.79
RPL23AP49-202ENST00000638439 DCAF8L1A6NGE4 600 aa19.95■□□□□ 0.78
RPL23AP49-202ENST00000638439 RNF216Q9NWF9 866 aaPredicted RBP19.94■□□□□ 0.78
RPL23AP49-202ENST00000638439 BICRAQ9NZM4 1560 aa19.91■□□□□ 0.78
RPL23AP49-202ENST00000638439 SHROOM4Q9ULL8 1493 aa19.7■□□□□ 0.74
RPL23AP49-202ENST00000638439 NCBP3Q53F19 620 aaKnown RBP19.64■□□□□ 0.73
RPL23AP49-202ENST00000638439 RNF39Q9H2S5 420 aa19.59■□□□□ 0.73
RPL23AP49-202ENST00000638439 NPM3O75607 178 aaKnown RBP19.54■□□□□ 0.72
RPL23AP49-202ENST00000638439 DNAJC5BQ9UF47 199 aa19.44■□□□□ 0.7
RPL23AP49-202ENST00000638439 EIF4G1Q04637 1599 aaKnown RBP19.38■□□□□ 0.69
RPL23AP49-202ENST00000638439 CC2D2AQ9P2K1 1620 aa19.26■□□□□ 0.67
RPL23AP49-202ENST00000638439 CECR2Q9BXF3 1484 aa19.25■□□□□ 0.67
RPL23AP49-202ENST00000638439 KCNA4P22459 653 aa19.23■□□□□ 0.67
RPL23AP49-202ENST00000638439 C1QBPQ07021 282 aaKnown RBP19.22■□□□□ 0.67
RPL23AP49-202ENST00000638439 BAZ1AQ9NRL2 1556 aaPredicted RBP19.15■□□□□ 0.66
RPL23AP49-202ENST00000638439 SMARCA4P51532 1647 aa19.14■□□□□ 0.66
RPL23AP49-202ENST00000638439 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.1■□□□□ 0.65
RPL23AP49-202ENST00000638439 MROH2BQ7Z745 1585 aa19.06■□□□□ 0.64
RPL23AP49-202ENST00000638439 ATAD2BQ9ULI0 1458 aa19.01■□□□□ 0.63
RPL23AP49-202ENST00000638439 SMARCA2P51531 1590 aa18.99■□□□□ 0.63
RPL23AP49-202ENST00000638439 NCAPD3P42695 1498 aa18.97■□□□□ 0.63
RPL23AP49-202ENST00000638439 PEG3Q9GZU2 1588 aa18.94■□□□□ 0.62
RPL23AP49-202ENST00000638439 RSF1Q96T23 1441 aaPredicted RBP18.91■□□□□ 0.62
RPL23AP49-202ENST00000638439 HMGXB3Q12766 1538 aa18.88■□□□□ 0.61
RPL23AP49-202ENST00000638439 BAZ1BQ9UIG0 1483 aaKnown RBP18.87■□□□□ 0.61
RPL23AP49-202ENST00000638439 WIZO95785 1651 aa18.86■□□□□ 0.61
RPL23AP49-202ENST00000638439 U3KPZ7 1027 aaPredicted RBP18.82■□□□□ 0.6
RPL23AP49-202ENST00000638439 SLC4A2P04920 1241 aa18.72■□□□□ 0.59
RPL23AP49-202ENST00000638439 TOP2AP11388 1531 aaKnown RBP18.66■□□□□ 0.58
RPL23AP49-202ENST00000638439 SUPT5HO00267 1087 aaKnown RBP18.59■□□□□ 0.57
RPL23AP49-202ENST00000638439 SPINK5Q9NQ38 1064 aaPredicted RBP18.57■□□□□ 0.56
RPL23AP49-202ENST00000638439 NESP48681 1621 aa18.48■□□□□ 0.55
RPL23AP49-202ENST00000638439 CCDC88BA6NC98 1476 aa18.46■□□□□ 0.55
RPL23AP49-202ENST00000638439 CADPSQ9ULU8 1353 aa18.44■□□□□ 0.54
RPL23AP49-202ENST00000638439 LAMC3Q9Y6N6 1575 aa18.44■□□□□ 0.54
RPL23AP49-202ENST00000638439 CAPN15O75808 1086 aa18.4■□□□□ 0.54
RPL23AP49-202ENST00000638439 CFTRP13569 1480 aa18.36■□□□□ 0.53
RPL23AP49-202ENST00000638439 DSG3P32926 999 aa18.36■□□□□ 0.53
RPL23AP49-202ENST00000638439 ERCC6Q03468 1493 aa18.35■□□□□ 0.53
RPL23AP49-202ENST00000638439 PDS5BQ9NTI5 1447 aa18.34■□□□□ 0.53
RPL23AP49-202ENST00000638439 KIF21AQ7Z4S6 1674 aa18.25■□□□□ 0.51
RPL23AP49-202ENST00000638439 FANCD2Q9BXW9 1451 aa18.23■□□□□ 0.51
RPL23AP49-202ENST00000638439 PRDM2Q13029 1718 aa18.19■□□□□ 0.5
RPL23AP49-202ENST00000638439 POTEHQ6S545 545 aa18.19■□□□□ 0.5
RPL23AP49-202ENST00000638439 CEP164Q9UPV0 1460 aa18.18■□□□□ 0.5
RPL23AP49-202ENST00000638439 TRHP20396 242 aaPredicted RBP18.15■□□□□ 0.5
RPL23AP49-202ENST00000638439 THOC2Q8NI27 1593 aaKnown RBP18.13■□□□□ 0.49
RPL23AP49-202ENST00000638439 MRC2Q9UBG0 1479 aa18.12■□□□□ 0.49
RPL23AP49-202ENST00000638439 CUX2O14529 1486 aa18.08■□□□□ 0.49
RPL23AP49-202ENST00000638439 ABCB7O75027 752 aa18.07■□□□□ 0.48
RPL23AP49-202ENST00000638439 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.06■□□□□ 0.48
RPL23AP49-202ENST00000638439 HNRNPUL2Q1KMD3 747 aaKnown RBP18.06■□□□□ 0.48
RPL23AP49-202ENST00000638439 SLC4A1APQ9BWU0 796 aaKnown RBP18.06■□□□□ 0.48
RPL23AP49-202ENST00000638439 WDR62O43379 1518 aa18.04■□□□□ 0.48
RPL23AP49-202ENST00000638439 URB2Q14146 1524 aaKnown RBP18.03■□□□□ 0.48
RPL23AP49-202ENST00000638439 SAMD1Q6SPF0 538 aaPredicted RBP18.02■□□□□ 0.48
RPL23AP49-202ENST00000638439 APLP2Q06481 763 aa18.01■□□□□ 0.47
RPL23AP49-202ENST00000638439 ZNF219Q9P2Y4 722 aaPredicted RBP18.01■□□□□ 0.47
RPL23AP49-202ENST00000638439 ABCC8Q09428 1581 aa17.96■□□□□ 0.47
RPL23AP49-202ENST00000638439 MYCNP04198 464 aaPredicted RBP17.96■□□□□ 0.47
RPL23AP49-202ENST00000638439 TOPBP1Q92547 1522 aa17.94■□□□□ 0.46
RPL23AP49-202ENST00000638439 DNMBPQ6XZF7 1577 aa17.93■□□□□ 0.46
RPL23AP49-202ENST00000638439 CUX1P39880 1505 aa17.88■□□□□ 0.45
RPL23AP49-202ENST00000638439 WRNQ14191 1432 aaPredicted RBP eCLIP17.82■□□□□ 0.44
RPL23AP49-202ENST00000638439 FOXD4L1Q9NU39 408 aa17.82■□□□□ 0.44
RPL23AP49-202ENST00000638439 POLA1P09884 1462 aaPredicted RBP17.8■□□□□ 0.44
RPL23AP49-202ENST00000638439 IFT140Q96RY7 1462 aa17.8■□□□□ 0.44
RPL23AP49-202ENST00000638439 FGD5Q6ZNL6 1462 aa17.79■□□□□ 0.44
RPL23AP49-202ENST00000638439 ZBTB22O15209 634 aa17.77■□□□□ 0.44
RPL23AP49-202ENST00000638439 SYNJ1O43426 1573 aa17.76■□□□□ 0.43
RPL23AP49-202ENST00000638439 SOGA1O94964 1423 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms