RNA–Protein interactions for RNA: ENST00000505254.6

CARMN-201, cardiac mesoderm enhancer-associated non-coding RNA, humanhuman

TSL 5 BASIC

Gene CARMN, Length 3,950 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMN-201ENST00000505254 NISCHQ9Y2I1 1504 aa18.52■□□□□ 0.56
CARMN-201ENST00000505254 DCAF8L2P0C7V8 631 aa17.55■□□□□ 0.4
CARMN-201ENST00000505254 SUPT5HO00267 1087 aaKnown RBP17.45■□□□□ 0.38
CARMN-201ENST00000505254 SHROOM4Q9ULL8 1493 aa17.33■□□□□ 0.36
CARMN-201ENST00000505254 PCGF6Q9BYE7 350 aa16.69■□□□□ 0.26
CARMN-201ENST00000505254 EHMT2Q96KQ7 1210 aa16.53■□□□□ 0.24
CARMN-201ENST00000505254 FAM9AQ8IZU1 332 aaPredicted RBP16.32■□□□□ 0.2
CARMN-201ENST00000505254 HRCP23327 699 aa16.3■□□□□ 0.2
CARMN-201ENST00000505254 CHIC1Q5VXU3 224 aa16.23■□□□□ 0.19
CARMN-201ENST00000505254 TRIM41Q8WV44 630 aa16.1■□□□□ 0.17
CARMN-201ENST00000505254 LOC105371045A0A1W2PR82 267 aa16.1■□□□□ 0.17
CARMN-201ENST00000505254 PPARGC1BQ86YN6 1023 aaKnown RBP16.07■□□□□ 0.16
CARMN-201ENST00000505254 ZEB1P37275 1124 aaPredicted RBP16.06■□□□□ 0.16
CARMN-201ENST00000505254 TTBK1Q5TCY1 1321 aaPredicted RBP16.02■□□□□ 0.15
CARMN-201ENST00000505254 TRIM26Q12899 539 aaPredicted RBP16.01■□□□□ 0.15
CARMN-201ENST00000505254 CCER1Q8TC90 406 aaPredicted RBP15.9■□□□□ 0.14
CARMN-201ENST00000505254 PELP1Q8IZL8 1130 aaKnown RBP15.82■□□□□ 0.12
CARMN-201ENST00000505254 CENPBP07199 599 aaPredicted RBP15.77■□□□□ 0.12
CARMN-201ENST00000505254 APLP2Q06481 763 aa15.75■□□□□ 0.11
CARMN-201ENST00000505254 MYO15BQ96JP2 1530 aa15.75■□□□□ 0.11
CARMN-201ENST00000505254 UBTFP17480 764 aaKnown RBP15.63■□□□□ 0.09
CARMN-201ENST00000505254 RANGAP1P46060 587 aaPredicted RBP15.61■□□□□ 0.09
CARMN-201ENST00000505254 YTHDC1Q96MU7 727 aaKnown RBP15.57■□□□□ 0.08
CARMN-201ENST00000505254 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.52■□□□□ 0.08
CARMN-201ENST00000505254 ZCCHC6Q5VYS8 1495 aaKnown RBP15.5■□□□□ 0.07
CARMN-201ENST00000505254 DCAF1Q9Y4B6 1507 aa15.43■□□□□ 0.06
CARMN-201ENST00000505254 DIEXFQ68CQ4 756 aaKnown RBP15.37■□□□□ 0.05
CARMN-201ENST00000505254 SCAF1Q9H7N4 1312 aaKnown RBP15.33■□□□□ 0.05
CARMN-201ENST00000505254 HNRNPUL2Q1KMD3 747 aaKnown RBP15.33■□□□□ 0.04
CARMN-201ENST00000505254 MYT1Q01538 1121 aa15.25■□□□□ 0.03
CARMN-201ENST00000505254 GTF3C3Q9Y5Q9 886 aa15.23■□□□□ 0.03
CARMN-201ENST00000505254 ATP1B4Q9UN42 357 aaPredicted RBP15.18■□□□□ 0.02
CARMN-201ENST00000505254 ACIN1Q9UKV3 1341 aaKnown RBP15.16■□□□□ 0.02
CARMN-201ENST00000505254 CCDC180Q9P1Z9 1646 aa15.14■□□□□ 0.01
CARMN-201ENST00000505254 ITGAEP38570 1179 aa15.12■□□□□ 0.01
CARMN-201ENST00000505254 ABCC9O60706 1549 aa15.1■□□□□ 0.01
CARMN-201ENST00000505254 ZNF316A6NFI3 1004 aaPredicted RBP15.05■□□□□ -0
CARMN-201ENST00000505254 NEFLP07196 543 aa15.05■□□□□ -0
CARMN-201ENST00000505254 SCRIBQ14160 1630 aa15.01□□□□□ -0.01
CARMN-201ENST00000505254 NEUROD1Q13562 356 aa15.01□□□□□ -0.01
CARMN-201ENST00000505254 CSRNP3Q8WYN3 585 aa14.97□□□□□ -0.01
CARMN-201ENST00000505254 ERICH6Q7L0X2 663 aa14.97□□□□□ -0.01
CARMN-201ENST00000505254 RSF1Q96T23 1441 aaPredicted RBP14.94□□□□□ -0.02
CARMN-201ENST00000505254 PABPN1Q86U42 306 aaKnown RBP eCLIP14.93□□□□□ -0.02
CARMN-201ENST00000505254 BCANQ96GW7 911 aa14.77□□□□□ -0.04
CARMN-201ENST00000505254 FAM50AQ14320 339 aaKnown RBP14.74□□□□□ -0.05
CARMN-201ENST00000505254 MIER1Q8N108 512 aa14.74□□□□□ -0.05
CARMN-201ENST00000505254 CEP162Q5TB80 1403 aa14.66□□□□□ -0.06
CARMN-201ENST00000505254 CNGB1Q14028 1251 aaPredicted RBP14.64□□□□□ -0.07
CARMN-201ENST00000505254 RB1CC1Q8TDY2 1594 aa14.63□□□□□ -0.07
CARMN-201ENST00000505254 CECR2Q9BXF3 1484 aa14.61□□□□□ -0.07
CARMN-201ENST00000505254 POLR3GLQ9BT43 218 aa14.61□□□□□ -0.07
CARMN-201ENST00000505254 ANP32CO43423 234 aa14.58□□□□□ -0.08
CARMN-201ENST00000505254 CLIP1P30622 1438 aa14.55□□□□□ -0.08
CARMN-201ENST00000505254 TNIKQ9UKE5 1360 aa14.54□□□□□ -0.08
CARMN-201ENST00000505254 P3H3Q8IVL6 736 aa14.54□□□□□ -0.08
CARMN-201ENST00000505254 DDX10Q13206 875 aaKnown RBP14.51□□□□□ -0.09
CARMN-201ENST00000505254 FKBP8Q14318 412 aa14.5□□□□□ -0.09
CARMN-201ENST00000505254 CLSPNQ9HAW4 1339 aa14.5□□□□□ -0.09
CARMN-201ENST00000505254 EEA1Q15075 1411 aa14.49□□□□□ -0.09
CARMN-201ENST00000505254 GOLGA3Q08378 1498 aa14.49□□□□□ -0.09
CARMN-201ENST00000505254 TRIM52Q96A61 297 aa14.48□□□□□ -0.09
CARMN-201ENST00000505254 SOGA1O94964 1423 aa14.46□□□□□ -0.09
CARMN-201ENST00000505254 MROH2BQ7Z745 1585 aa14.46□□□□□ -0.1
CARMN-201ENST00000505254 WRNQ14191 1432 aaPredicted RBP eCLIP14.42□□□□□ -0.1
CARMN-201ENST00000505254 CDK11AQ9UQ88 783 aaPredicted RBP14.41□□□□□ -0.1
CARMN-201ENST00000505254 NACADO15069 1562 aa14.41□□□□□ -0.1
CARMN-201ENST00000505254 HIRIP3Q9BW71 556 aaPredicted RBP14.38□□□□□ -0.11
CARMN-201ENST00000505254 CCDC88BA6NC98 1476 aa14.38□□□□□ -0.11
CARMN-201ENST00000505254 ABCC8Q09428 1581 aa14.36□□□□□ -0.11
CARMN-201ENST00000505254 BAZ1AQ9NRL2 1556 aaPredicted RBP14.36□□□□□ -0.11
CARMN-201ENST00000505254 CEP164Q9UPV0 1460 aa14.34□□□□□ -0.11
CARMN-201ENST00000505254 HNRNPUQ00839 825 aaKnown RBP eCLIP14.32□□□□□ -0.12
CARMN-201ENST00000505254 TONSLQ96HA7 1378 aa14.32□□□□□ -0.12
CARMN-201ENST00000505254 ZNF326Q5BKZ1 582 aaKnown RBP14.31□□□□□ -0.12
CARMN-201ENST00000505254 SUPT16HQ9Y5B9 1047 aaKnown RBP14.29□□□□□ -0.12
CARMN-201ENST00000505254 WIZO95785 1651 aa14.29□□□□□ -0.12
CARMN-201ENST00000505254 RTL5Q5HYW3 569 aaPredicted RBP14.28□□□□□ -0.12
CARMN-201ENST00000505254 ARID3CA6NKF2 412 aa14.28□□□□□ -0.12
CARMN-201ENST00000505254 DAXXQ9UER7 740 aaPredicted RBP14.27□□□□□ -0.13
CARMN-201ENST00000505254 BCL11AQ9H165 835 aa14.25□□□□□ -0.13
CARMN-201ENST00000505254 IRX6P78412 446 aaPredicted RBP14.22□□□□□ -0.13
CARMN-201ENST00000505254 VPS8Q8N3P4 1428 aa14.22□□□□□ -0.13
CARMN-201ENST00000505254 FAM9BQ8IZU0 186 aa14.21□□□□□ -0.13
CARMN-201ENST00000505254 SIN3AQ96ST3 1273 aa14.21□□□□□ -0.13
CARMN-201ENST00000505254 KANK4Q5T7N3 995 aaPredicted RBP14.19□□□□□ -0.14
CARMN-201ENST00000505254 ANP32EQ9BTT0 268 aa14.18□□□□□ -0.14
CARMN-201ENST00000505254 CHIC2Q9UKJ5 165 aa14.18□□□□□ -0.14
CARMN-201ENST00000505254 RUSC2Q8N2Y8 1516 aa14.17□□□□□ -0.14
CARMN-201ENST00000505254 BAZ1BQ9UIG0 1483 aaKnown RBP14.16□□□□□ -0.14
CARMN-201ENST00000505254 CCNB3Q8WWL7 1395 aa14.15□□□□□ -0.14
CARMN-201ENST00000505254 KIF27Q86VH2 1401 aa14.13□□□□□ -0.15
CARMN-201ENST00000505254 MTUS2Q5JR59 1369 aa14.11□□□□□ -0.15
CARMN-201ENST00000505254 TSHZ2Q9NRE2 1034 aa14.11□□□□□ -0.15
CARMN-201ENST00000505254 MRS2Q9HD23 443 aa14.11□□□□□ -0.15
CARMN-201ENST00000505254 TOP2AP11388 1531 aaKnown RBP14.1□□□□□ -0.15
CARMN-201ENST00000505254 ANP32AP39687 249 aaKnown RBP14.09□□□□□ -0.15
CARMN-201ENST00000505254 MYT1LQ9UL68 1186 aa14.08□□□□□ -0.16
CARMN-201ENST00000505254 RRP7BPQ9NSQ0 103 aa14.07□□□□□ -0.16
CARMN-201ENST00000505254 ZNF777Q9ULD5 760 aaPredicted RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 259.7 ms