Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
CDC42SE1Q9NRR8 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
CDC42SE1Q9NRR8 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
CDC42SE1Q9NRR8 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
CDC42SE1Q9NRR8 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
CDC42SE1Q9NRR8 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
CDC42SE1Q9NRR8 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
CDC42SE1Q9NRR8 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CDC42SE1Q9NRR8 AC079630.1-202ENST00000618127 1840 ntBASIC10.84□□□□□ -0.67
CDC42SE1Q9NRR8 AC012313.1-201ENST00000593393 3059 ntBASIC10.84□□□□□ -0.67
CDC42SE1Q9NRR8 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CDC42SE1Q9NRR8 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC10.84□□□□□ -0.67
CDC42SE1Q9NRR8 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC10.84□□□□□ -0.67
CDC42SE1Q9NRR8 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
CDC42SE1Q9NRR8 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CDC42SE1Q9NRR8 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CDC42SE1Q9NRR8 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CDC42SE1Q9NRR8 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CDC42SE1Q9NRR8 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
CDC42SE1Q9NRR8 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
CDC42SE1Q9NRR8 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC10.84□□□□□ -0.67
CDC42SE1Q9NRR8 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC10.84□□□□□ -0.67
CDC42SE1Q9NRR8 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
CDC42SE1Q9NRR8 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC10.84□□□□□ -0.67
CDC42SE1Q9NRR8 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
CDC42SE1Q9NRR8 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC10.84□□□□□ -0.67
CDC42SE1Q9NRR8 FEM1AP4-201ENST00000443167 1987 ntBASIC10.84□□□□□ -0.67
CDC42SE1Q9NRR8 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
CDC42SE1Q9NRR8 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CDC42SE1Q9NRR8 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC10.84□□□□□ -0.67
CDC42SE1Q9NRR8 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
CDC42SE1Q9NRR8 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CDC42SE1Q9NRR8 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
CDC42SE1Q9NRR8 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
CDC42SE1Q9NRR8 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CDC42SE1Q9NRR8 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CDC42SE1Q9NRR8 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC10.84□□□□□ -0.67
CDC42SE1Q9NRR8 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CDC42SE1Q9NRR8 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CDC42SE1Q9NRR8 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CDC42SE1Q9NRR8 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
CDC42SE1Q9NRR8 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
CDC42SE1Q9NRR8 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CDC42SE1Q9NRR8 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CDC42SE1Q9NRR8 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
CDC42SE1Q9NRR8 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CDC42SE1Q9NRR8 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
CDC42SE1Q9NRR8 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC10.83□□□□□ -0.68
CDC42SE1Q9NRR8 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
CDC42SE1Q9NRR8 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
CDC42SE1Q9NRR8 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
CDC42SE1Q9NRR8 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CDC42SE1Q9NRR8 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
CDC42SE1Q9NRR8 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CDC42SE1Q9NRR8 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC10.83□□□□□ -0.68
CDC42SE1Q9NRR8 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC10.83□□□□□ -0.68
CDC42SE1Q9NRR8 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CDC42SE1Q9NRR8 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CDC42SE1Q9NRR8 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
CDC42SE1Q9NRR8 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CDC42SE1Q9NRR8 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
CDC42SE1Q9NRR8 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
CDC42SE1Q9NRR8 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
CDC42SE1Q9NRR8 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CDC42SE1Q9NRR8 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CDC42SE1Q9NRR8 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
CDC42SE1Q9NRR8 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
CDC42SE1Q9NRR8 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC10.83□□□□□ -0.68
CDC42SE1Q9NRR8 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC10.83□□□□□ -0.68
CDC42SE1Q9NRR8 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC10.83□□□□□ -0.68
CDC42SE1Q9NRR8 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CDC42SE1Q9NRR8 AC099398.1-201ENST00000567919 2776 ntBASIC10.82□□□□□ -0.68
CDC42SE1Q9NRR8 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
CDC42SE1Q9NRR8 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CDC42SE1Q9NRR8 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CDC42SE1Q9NRR8 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CDC42SE1Q9NRR8 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
CDC42SE1Q9NRR8 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CDC42SE1Q9NRR8 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
CDC42SE1Q9NRR8 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
CDC42SE1Q9NRR8 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
CDC42SE1Q9NRR8 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC10.82□□□□□ -0.68
CDC42SE1Q9NRR8 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
CDC42SE1Q9NRR8 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
CDC42SE1Q9NRR8 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC10.82□□□□□ -0.68
CDC42SE1Q9NRR8 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CDC42SE1Q9NRR8 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CDC42SE1Q9NRR8 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC10.82□□□□□ -0.68
CDC42SE1Q9NRR8 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
CDC42SE1Q9NRR8 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CDC42SE1Q9NRR8 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CDC42SE1Q9NRR8 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC10.82□□□□□ -0.68
CDC42SE1Q9NRR8 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
CDC42SE1Q9NRR8 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
CDC42SE1Q9NRR8 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CDC42SE1Q9NRR8 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC10.82□□□□□ -0.68
CDC42SE1Q9NRR8 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CDC42SE1Q9NRR8 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CDC42SE1Q9NRR8 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC10.82□□□□□ -0.68
CDC42SE1Q9NRR8 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms