Protein–RNA interactions for Protein: Q9HBF4

ZFYVE1, Zinc finger FYVE domain-containing protein 1, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE1Q9HBF4 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZFYVE1Q9HBF4 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.96■□□□□ 0.95
ZFYVE1Q9HBF4 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.96■□□□□ 0.95
ZFYVE1Q9HBF4 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZFYVE1Q9HBF4 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.95■□□□□ 0.94
ZFYVE1Q9HBF4 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.95■□□□□ 0.94
ZFYVE1Q9HBF4 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ZFYVE1Q9HBF4 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.95■□□□□ 0.94
ZFYVE1Q9HBF4 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ZFYVE1Q9HBF4 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ZFYVE1Q9HBF4 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ZFYVE1Q9HBF4 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.95■□□□□ 0.94
ZFYVE1Q9HBF4 MYCNOS-205ENST00000641950 531 ntBASIC20.95■□□□□ 0.94
ZFYVE1Q9HBF4 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.95■□□□□ 0.94
ZFYVE1Q9HBF4 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ZFYVE1Q9HBF4 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.95■□□□□ 0.94
ZFYVE1Q9HBF4 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
ZFYVE1Q9HBF4 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ZFYVE1Q9HBF4 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.95■□□□□ 0.94
ZFYVE1Q9HBF4 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.94■□□□□ 0.94
ZFYVE1Q9HBF4 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
ZFYVE1Q9HBF4 AC026310.3-201ENST00000625186 2373 ntBASIC20.94■□□□□ 0.94
ZFYVE1Q9HBF4 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
ZFYVE1Q9HBF4 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.94■□□□□ 0.94
ZFYVE1Q9HBF4 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
ZFYVE1Q9HBF4 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
ZFYVE1Q9HBF4 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZFYVE1Q9HBF4 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
ZFYVE1Q9HBF4 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.94■□□□□ 0.94
ZFYVE1Q9HBF4 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ZFYVE1Q9HBF4 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.94■□□□□ 0.94
ZFYVE1Q9HBF4 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
ZFYVE1Q9HBF4 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ZFYVE1Q9HBF4 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.94■□□□□ 0.94
ZFYVE1Q9HBF4 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.94■□□□□ 0.94
ZFYVE1Q9HBF4 IKBKGP1-201ENST00000612193 1073 ntBASIC20.94■□□□□ 0.94
ZFYVE1Q9HBF4 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.94■□□□□ 0.94
ZFYVE1Q9HBF4 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ZFYVE1Q9HBF4 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.94■□□□□ 0.94
ZFYVE1Q9HBF4 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
ZFYVE1Q9HBF4 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.94■□□□□ 0.94
ZFYVE1Q9HBF4 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.94■□□□□ 0.94
ZFYVE1Q9HBF4 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ZFYVE1Q9HBF4 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ZFYVE1Q9HBF4 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZFYVE1Q9HBF4 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
ZFYVE1Q9HBF4 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ZFYVE1Q9HBF4 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZFYVE1Q9HBF4 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZFYVE1Q9HBF4 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
ZFYVE1Q9HBF4 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
ZFYVE1Q9HBF4 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.93■□□□□ 0.94
ZFYVE1Q9HBF4 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.93■□□□□ 0.94
ZFYVE1Q9HBF4 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZFYVE1Q9HBF4 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ZFYVE1Q9HBF4 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.93■□□□□ 0.94
ZFYVE1Q9HBF4 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZFYVE1Q9HBF4 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
ZFYVE1Q9HBF4 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ZFYVE1Q9HBF4 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZFYVE1Q9HBF4 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ZFYVE1Q9HBF4 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.92■□□□□ 0.94
ZFYVE1Q9HBF4 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.92■□□□□ 0.94
ZFYVE1Q9HBF4 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.92■□□□□ 0.94
ZFYVE1Q9HBF4 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.92■□□□□ 0.94
ZFYVE1Q9HBF4 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ZFYVE1Q9HBF4 AC092437.1-201ENST00000624794 1048 ntBASIC20.92■□□□□ 0.94
ZFYVE1Q9HBF4 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
ZFYVE1Q9HBF4 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.92■□□□□ 0.94
ZFYVE1Q9HBF4 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.92■□□□□ 0.94
ZFYVE1Q9HBF4 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ZFYVE1Q9HBF4 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
ZFYVE1Q9HBF4 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ZFYVE1Q9HBF4 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ZFYVE1Q9HBF4 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ZFYVE1Q9HBF4 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ZFYVE1Q9HBF4 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ZFYVE1Q9HBF4 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.91■□□□□ 0.94
ZFYVE1Q9HBF4 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
ZFYVE1Q9HBF4 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
ZFYVE1Q9HBF4 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.91■□□□□ 0.94
ZFYVE1Q9HBF4 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ZFYVE1Q9HBF4 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.91■□□□□ 0.94
ZFYVE1Q9HBF4 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.91■□□□□ 0.94
ZFYVE1Q9HBF4 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ZFYVE1Q9HBF4 AL024507.2-201ENST00000606070 2574 ntBASIC20.91■□□□□ 0.94
ZFYVE1Q9HBF4 AC092666.2-201ENST00000613287 246 ntBASIC20.91■□□□□ 0.94
ZFYVE1Q9HBF4 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ZFYVE1Q9HBF4 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.9■□□□□ 0.94
ZFYVE1Q9HBF4 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZFYVE1Q9HBF4 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZFYVE1Q9HBF4 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.9■□□□□ 0.94
ZFYVE1Q9HBF4 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZFYVE1Q9HBF4 AL137784.2-201ENST00000607332 1000 ntBASIC20.9■□□□□ 0.94
ZFYVE1Q9HBF4 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.9■□□□□ 0.94
ZFYVE1Q9HBF4 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.9■□□□□ 0.94
ZFYVE1Q9HBF4 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.9■□□□□ 0.94
ZFYVE1Q9HBF4 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
ZFYVE1Q9HBF4 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
ZFYVE1Q9HBF4 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms