Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CYSTM1Q9H1C7 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC12.26□□□□□ -0.45
CYSTM1Q9H1C7 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
CYSTM1Q9H1C7 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
CYSTM1Q9H1C7 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
CYSTM1Q9H1C7 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
CYSTM1Q9H1C7 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CYSTM1Q9H1C7 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
CYSTM1Q9H1C7 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CYSTM1Q9H1C7 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CYSTM1Q9H1C7 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
CYSTM1Q9H1C7 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CYSTM1Q9H1C7 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CYSTM1Q9H1C7 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CYSTM1Q9H1C7 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CYSTM1Q9H1C7 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CYSTM1Q9H1C7 MST1L-201ENST00000442552 2185 ntBASIC12.25□□□□□ -0.45
CYSTM1Q9H1C7 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CYSTM1Q9H1C7 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CYSTM1Q9H1C7 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
CYSTM1Q9H1C7 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CYSTM1Q9H1C7 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
CYSTM1Q9H1C7 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC12.25□□□□□ -0.45
CYSTM1Q9H1C7 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CYSTM1Q9H1C7 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC12.25□□□□□ -0.45
CYSTM1Q9H1C7 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC12.25□□□□□ -0.45
CYSTM1Q9H1C7 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CYSTM1Q9H1C7 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CYSTM1Q9H1C7 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
CYSTM1Q9H1C7 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC12.25□□□□□ -0.45
CYSTM1Q9H1C7 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CYSTM1Q9H1C7 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC12.25□□□□□ -0.45
CYSTM1Q9H1C7 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CYSTM1Q9H1C7 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC12.25□□□□□ -0.45
CYSTM1Q9H1C7 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CYSTM1Q9H1C7 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
CYSTM1Q9H1C7 AC068880.1-201ENST00000507289 2297 ntBASIC12.25□□□□□ -0.45
CYSTM1Q9H1C7 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CYSTM1Q9H1C7 AC018695.7-201ENST00000624587 2492 ntBASIC12.25□□□□□ -0.45
CYSTM1Q9H1C7 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CYSTM1Q9H1C7 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
CYSTM1Q9H1C7 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CYSTM1Q9H1C7 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CYSTM1Q9H1C7 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CYSTM1Q9H1C7 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC12.24□□□□□ -0.45
CYSTM1Q9H1C7 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CYSTM1Q9H1C7 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC12.24□□□□□ -0.45
CYSTM1Q9H1C7 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CYSTM1Q9H1C7 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC12.24□□□□□ -0.45
CYSTM1Q9H1C7 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CYSTM1Q9H1C7 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC12.24□□□□□ -0.45
CYSTM1Q9H1C7 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
CYSTM1Q9H1C7 AL161729.1-201ENST00000604104 1402 ntBASIC12.24□□□□□ -0.45
CYSTM1Q9H1C7 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC12.24□□□□□ -0.45
CYSTM1Q9H1C7 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CYSTM1Q9H1C7 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CYSTM1Q9H1C7 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
CYSTM1Q9H1C7 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CYSTM1Q9H1C7 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CYSTM1Q9H1C7 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CYSTM1Q9H1C7 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CYSTM1Q9H1C7 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
CYSTM1Q9H1C7 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CYSTM1Q9H1C7 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC12.23□□□□□ -0.45
CYSTM1Q9H1C7 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC12.23□□□□□ -0.45
CYSTM1Q9H1C7 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CYSTM1Q9H1C7 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CYSTM1Q9H1C7 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC12.23□□□□□ -0.45
CYSTM1Q9H1C7 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC12.23□□□□□ -0.45
CYSTM1Q9H1C7 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC12.23□□□□□ -0.45
CYSTM1Q9H1C7 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CYSTM1Q9H1C7 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC12.23□□□□□ -0.45
CYSTM1Q9H1C7 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
CYSTM1Q9H1C7 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CYSTM1Q9H1C7 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC12.23□□□□□ -0.45
CYSTM1Q9H1C7 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
CYSTM1Q9H1C7 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC12.23□□□□□ -0.45
CYSTM1Q9H1C7 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC12.23□□□□□ -0.45
CYSTM1Q9H1C7 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CYSTM1Q9H1C7 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CYSTM1Q9H1C7 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CYSTM1Q9H1C7 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CYSTM1Q9H1C7 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CYSTM1Q9H1C7 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CYSTM1Q9H1C7 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CYSTM1Q9H1C7 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
CYSTM1Q9H1C7 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CYSTM1Q9H1C7 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
CYSTM1Q9H1C7 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
CYSTM1Q9H1C7 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC12.23□□□□□ -0.45
CYSTM1Q9H1C7 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CYSTM1Q9H1C7 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC12.23□□□□□ -0.45
CYSTM1Q9H1C7 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC12.23□□□□□ -0.45
CYSTM1Q9H1C7 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CYSTM1Q9H1C7 PCDHA12-202ENST00000613593 2588 ntBASIC12.23□□□□□ -0.45
CYSTM1Q9H1C7 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
CYSTM1Q9H1C7 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CYSTM1Q9H1C7 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC12.22□□□□□ -0.45
CYSTM1Q9H1C7 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CYSTM1Q9H1C7 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms