Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
POLR2J3Q9H1A7 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.28■□□□□ 0.68
POLR2J3Q9H1A7 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.28■□□□□ 0.68
POLR2J3Q9H1A7 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
POLR2J3Q9H1A7 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.28■□□□□ 0.68
POLR2J3Q9H1A7 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
POLR2J3Q9H1A7 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.28■□□□□ 0.68
POLR2J3Q9H1A7 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
POLR2J3Q9H1A7 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
POLR2J3Q9H1A7 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.28■□□□□ 0.68
POLR2J3Q9H1A7 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
POLR2J3Q9H1A7 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
POLR2J3Q9H1A7 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
POLR2J3Q9H1A7 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
POLR2J3Q9H1A7 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
POLR2J3Q9H1A7 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.27■□□□□ 0.68
POLR2J3Q9H1A7 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
POLR2J3Q9H1A7 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.27■□□□□ 0.68
POLR2J3Q9H1A7 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.27■□□□□ 0.68
POLR2J3Q9H1A7 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.27■□□□□ 0.68
POLR2J3Q9H1A7 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
POLR2J3Q9H1A7 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
POLR2J3Q9H1A7 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.27■□□□□ 0.68
POLR2J3Q9H1A7 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.27■□□□□ 0.68
POLR2J3Q9H1A7 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.27■□□□□ 0.68
POLR2J3Q9H1A7 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.27■□□□□ 0.68
POLR2J3Q9H1A7 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
POLR2J3Q9H1A7 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
POLR2J3Q9H1A7 AC055733.4-201ENST00000638462 1354 ntBASIC19.27■□□□□ 0.68
POLR2J3Q9H1A7 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
POLR2J3Q9H1A7 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.67
POLR2J3Q9H1A7 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
POLR2J3Q9H1A7 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
POLR2J3Q9H1A7 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
POLR2J3Q9H1A7 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
POLR2J3Q9H1A7 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
POLR2J3Q9H1A7 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
POLR2J3Q9H1A7 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
POLR2J3Q9H1A7 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
POLR2J3Q9H1A7 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
POLR2J3Q9H1A7 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
POLR2J3Q9H1A7 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
POLR2J3Q9H1A7 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
POLR2J3Q9H1A7 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.26■□□□□ 0.67
POLR2J3Q9H1A7 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.26■□□□□ 0.67
POLR2J3Q9H1A7 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
POLR2J3Q9H1A7 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
POLR2J3Q9H1A7 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
POLR2J3Q9H1A7 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
POLR2J3Q9H1A7 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
POLR2J3Q9H1A7 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
POLR2J3Q9H1A7 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
POLR2J3Q9H1A7 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
POLR2J3Q9H1A7 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
POLR2J3Q9H1A7 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
POLR2J3Q9H1A7 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.25■□□□□ 0.67
POLR2J3Q9H1A7 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
POLR2J3Q9H1A7 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.25■□□□□ 0.67
POLR2J3Q9H1A7 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
POLR2J3Q9H1A7 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
POLR2J3Q9H1A7 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
POLR2J3Q9H1A7 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
POLR2J3Q9H1A7 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.25■□□□□ 0.67
POLR2J3Q9H1A7 AC105233.4-201ENST00000642045 216 ntBASIC19.25■□□□□ 0.67
POLR2J3Q9H1A7 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
POLR2J3Q9H1A7 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
POLR2J3Q9H1A7 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.24■□□□□ 0.67
POLR2J3Q9H1A7 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
POLR2J3Q9H1A7 AC005224.4-201ENST00000583262 1652 ntBASIC19.24■□□□□ 0.67
POLR2J3Q9H1A7 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
POLR2J3Q9H1A7 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
POLR2J3Q9H1A7 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
POLR2J3Q9H1A7 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
POLR2J3Q9H1A7 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
POLR2J3Q9H1A7 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
POLR2J3Q9H1A7 EDA-201ENST00000338901 1233 ntBASIC19.24■□□□□ 0.67
POLR2J3Q9H1A7 AC099791.1-201ENST00000416440 715 ntBASIC19.24■□□□□ 0.67
POLR2J3Q9H1A7 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
POLR2J3Q9H1A7 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
POLR2J3Q9H1A7 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
POLR2J3Q9H1A7 AC008764.7-201ENST00000593779 1081 ntBASIC19.24■□□□□ 0.67
POLR2J3Q9H1A7 AC131212.1-201ENST00000613771 668 ntBASIC19.24■□□□□ 0.67
POLR2J3Q9H1A7 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.24■□□□□ 0.67
POLR2J3Q9H1A7 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
POLR2J3Q9H1A7 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
POLR2J3Q9H1A7 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
POLR2J3Q9H1A7 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
POLR2J3Q9H1A7 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
POLR2J3Q9H1A7 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
POLR2J3Q9H1A7 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.24■□□□□ 0.67
POLR2J3Q9H1A7 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
POLR2J3Q9H1A7 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
POLR2J3Q9H1A7 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
POLR2J3Q9H1A7 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
POLR2J3Q9H1A7 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
POLR2J3Q9H1A7 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
POLR2J3Q9H1A7 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
POLR2J3Q9H1A7 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
POLR2J3Q9H1A7 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
POLR2J3Q9H1A7 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms