Protein–RNA interactions for Protein: Q99523

SORT1, Sortilin, humanhuman

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1Q99523 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.41■□□□□ 0.86
SORT1Q99523 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SORT1Q99523 AL162377.1-201ENST00000618844 1793 ntBASIC20.41■□□□□ 0.86
SORT1Q99523 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.41■□□□□ 0.86
SORT1Q99523 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
SORT1Q99523 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.4■□□□□ 0.86
SORT1Q99523 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SORT1Q99523 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
SORT1Q99523 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
SORT1Q99523 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SORT1Q99523 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SORT1Q99523 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
SORT1Q99523 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.4■□□□□ 0.86
SORT1Q99523 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.4■□□□□ 0.86
SORT1Q99523 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
SORT1Q99523 DUX4L19-201ENST00000557448 1267 ntBASIC20.4■□□□□ 0.86
SORT1Q99523 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
SORT1Q99523 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.4■□□□□ 0.86
SORT1Q99523 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.4■□□□□ 0.86
SORT1Q99523 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.4■□□□□ 0.86
SORT1Q99523 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.4■□□□□ 0.86
SORT1Q99523 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.4■□□□□ 0.86
SORT1Q99523 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SORT1Q99523 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.4■□□□□ 0.86
SORT1Q99523 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
SORT1Q99523 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SORT1Q99523 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.39■□□□□ 0.86
SORT1Q99523 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.39■□□□□ 0.86
SORT1Q99523 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
SORT1Q99523 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
SORT1Q99523 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
SORT1Q99523 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SORT1Q99523 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
SORT1Q99523 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.39■□□□□ 0.86
SORT1Q99523 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SORT1Q99523 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
SORT1Q99523 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SORT1Q99523 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
SORT1Q99523 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SORT1Q99523 AC133561.4-201ENST00000566112 224 ntBASIC20.39■□□□□ 0.85
SORT1Q99523 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
SORT1Q99523 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SORT1Q99523 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.39■□□□□ 0.85
SORT1Q99523 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.39■□□□□ 0.85
SORT1Q99523 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
SORT1Q99523 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SORT1Q99523 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SORT1Q99523 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SORT1Q99523 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
SORT1Q99523 AL512408.1-201ENST00000569378 2000 ntBASIC20.38■□□□□ 0.85
SORT1Q99523 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.38■□□□□ 0.85
SORT1Q99523 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SORT1Q99523 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SORT1Q99523 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SORT1Q99523 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.38■□□□□ 0.85
SORT1Q99523 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.38■□□□□ 0.85
SORT1Q99523 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.38■□□□□ 0.85
SORT1Q99523 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SORT1Q99523 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.38■□□□□ 0.85
SORT1Q99523 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SORT1Q99523 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.38■□□□□ 0.85
SORT1Q99523 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SORT1Q99523 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SORT1Q99523 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SORT1Q99523 AC112907.3-201ENST00000577781 2400 ntBASIC20.37■□□□□ 0.85
SORT1Q99523 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.37■□□□□ 0.85
SORT1Q99523 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
SORT1Q99523 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SORT1Q99523 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SORT1Q99523 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SORT1Q99523 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SORT1Q99523 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SORT1Q99523 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
SORT1Q99523 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
SORT1Q99523 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
SORT1Q99523 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.37■□□□□ 0.85
SORT1Q99523 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SORT1Q99523 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
SORT1Q99523 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.37■□□□□ 0.85
SORT1Q99523 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
SORT1Q99523 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.37■□□□□ 0.85
SORT1Q99523 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.37■□□□□ 0.85
SORT1Q99523 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.37■□□□□ 0.85
SORT1Q99523 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SORT1Q99523 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
SORT1Q99523 AC055733.4-201ENST00000638462 1354 ntBASIC20.36■□□□□ 0.85
SORT1Q99523 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.36■□□□□ 0.85
SORT1Q99523 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.36■□□□□ 0.85
SORT1Q99523 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SORT1Q99523 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.36■□□□□ 0.85
SORT1Q99523 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SORT1Q99523 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SORT1Q99523 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SORT1Q99523 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.36■□□□□ 0.85
SORT1Q99523 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
SORT1Q99523 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.36■□□□□ 0.85
SORT1Q99523 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SORT1Q99523 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.36■□□□□ 0.85
SORT1Q99523 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SORT1Q99523 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms