Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
LRRC58Q96CX6 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC58Q96CX6 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.86■□□□□ 0.77
LRRC58Q96CX6 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.86■□□□□ 0.77
LRRC58Q96CX6 SYT6-210ENST00000641643 1587 ntBASIC19.86■□□□□ 0.77
LRRC58Q96CX6 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC58Q96CX6 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.85■□□□□ 0.77
LRRC58Q96CX6 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRC58Q96CX6 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.85■□□□□ 0.77
LRRC58Q96CX6 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRC58Q96CX6 AC020907.5-201ENST00000624372 1936 ntBASIC19.85■□□□□ 0.77
LRRC58Q96CX6 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRC58Q96CX6 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.85■□□□□ 0.77
LRRC58Q96CX6 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LRRC58Q96CX6 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.85■□□□□ 0.77
LRRC58Q96CX6 AC136469.2-201ENST00000623944 1028 ntBASIC19.85■□□□□ 0.77
LRRC58Q96CX6 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
LRRC58Q96CX6 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRC58Q96CX6 AFG3L1P-217ENST00000557444 2447 ntBASIC19.85■□□□□ 0.77
LRRC58Q96CX6 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRC58Q96CX6 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.85■□□□□ 0.77
LRRC58Q96CX6 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.84■□□□□ 0.77
LRRC58Q96CX6 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
LRRC58Q96CX6 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.84■□□□□ 0.77
LRRC58Q96CX6 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.84■□□□□ 0.77
LRRC58Q96CX6 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRRC58Q96CX6 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LRRC58Q96CX6 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LRRC58Q96CX6 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRRC58Q96CX6 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LRRC58Q96CX6 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
LRRC58Q96CX6 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LRRC58Q96CX6 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.84■□□□□ 0.77
LRRC58Q96CX6 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
LRRC58Q96CX6 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.84■□□□□ 0.77
LRRC58Q96CX6 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRRC58Q96CX6 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.84■□□□□ 0.77
LRRC58Q96CX6 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
LRRC58Q96CX6 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRRC58Q96CX6 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.83■□□□□ 0.77
LRRC58Q96CX6 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
LRRC58Q96CX6 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
LRRC58Q96CX6 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
LRRC58Q96CX6 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
LRRC58Q96CX6 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.83■□□□□ 0.77
LRRC58Q96CX6 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LRRC58Q96CX6 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
LRRC58Q96CX6 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.83■□□□□ 0.77
LRRC58Q96CX6 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.83■□□□□ 0.77
LRRC58Q96CX6 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.83■□□□□ 0.77
LRRC58Q96CX6 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.83■□□□□ 0.77
LRRC58Q96CX6 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LRRC58Q96CX6 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LRRC58Q96CX6 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
LRRC58Q96CX6 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.83■□□□□ 0.76
LRRC58Q96CX6 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
LRRC58Q96CX6 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
LRRC58Q96CX6 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
LRRC58Q96CX6 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.76
LRRC58Q96CX6 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.83■□□□□ 0.76
LRRC58Q96CX6 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LRRC58Q96CX6 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.83■□□□□ 0.76
LRRC58Q96CX6 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
LRRC58Q96CX6 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
LRRC58Q96CX6 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
LRRC58Q96CX6 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.83■□□□□ 0.76
LRRC58Q96CX6 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.83■□□□□ 0.76
LRRC58Q96CX6 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC58Q96CX6 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC58Q96CX6 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC58Q96CX6 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.82■□□□□ 0.76
LRRC58Q96CX6 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC58Q96CX6 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC58Q96CX6 DUX4L19-201ENST00000557448 1267 ntBASIC19.82■□□□□ 0.76
LRRC58Q96CX6 AC011298.3-201ENST00000615796 283 ntBASIC19.82■□□□□ 0.76
LRRC58Q96CX6 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC58Q96CX6 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.82■□□□□ 0.76
LRRC58Q96CX6 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.82■□□□□ 0.76
LRRC58Q96CX6 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.82■□□□□ 0.76
LRRC58Q96CX6 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC58Q96CX6 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC58Q96CX6 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC58Q96CX6 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC58Q96CX6 SMUG1P1-201ENST00000590640 811 ntBASIC19.81■□□□□ 0.76
LRRC58Q96CX6 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.81■□□□□ 0.76
LRRC58Q96CX6 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC58Q96CX6 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
LRRC58Q96CX6 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC58Q96CX6 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
LRRC58Q96CX6 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
LRRC58Q96CX6 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
LRRC58Q96CX6 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC58Q96CX6 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC58Q96CX6 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC58Q96CX6 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC58Q96CX6 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.8■□□□□ 0.76
LRRC58Q96CX6 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
LRRC58Q96CX6 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
LRRC58Q96CX6 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
LRRC58Q96CX6 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms