Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SVIPQ8NHG7 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
SVIPQ8NHG7 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SVIPQ8NHG7 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SVIPQ8NHG7 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SVIPQ8NHG7 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SVIPQ8NHG7 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC13.25□□□□□ -0.29
SVIPQ8NHG7 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13.25□□□□□ -0.29
SVIPQ8NHG7 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.25□□□□□ -0.29
SVIPQ8NHG7 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SVIPQ8NHG7 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SVIPQ8NHG7 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SVIPQ8NHG7 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
SVIPQ8NHG7 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC13.25□□□□□ -0.29
SVIPQ8NHG7 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SVIPQ8NHG7 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
SVIPQ8NHG7 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
SVIPQ8NHG7 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SVIPQ8NHG7 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SVIPQ8NHG7 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC13.25□□□□□ -0.29
SVIPQ8NHG7 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC13.25□□□□□ -0.29
SVIPQ8NHG7 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC13.25□□□□□ -0.29
SVIPQ8NHG7 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SVIPQ8NHG7 ALDH9A1-201ENST00000354775 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SVIPQ8NHG7 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SVIPQ8NHG7 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC13.25□□□□□ -0.29
SVIPQ8NHG7 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SVIPQ8NHG7 AC090340.1-201ENST00000620778 4980 ntBASIC13.24□□□□□ -0.29
SVIPQ8NHG7 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SVIPQ8NHG7 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SVIPQ8NHG7 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SVIPQ8NHG7 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SVIPQ8NHG7 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SVIPQ8NHG7 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SVIPQ8NHG7 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC13.24□□□□□ -0.29
SVIPQ8NHG7 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SVIPQ8NHG7 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SVIPQ8NHG7 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SVIPQ8NHG7 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
SVIPQ8NHG7 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC13.24□□□□□ -0.29
SVIPQ8NHG7 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SVIPQ8NHG7 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SVIPQ8NHG7 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SVIPQ8NHG7 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SVIPQ8NHG7 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
SVIPQ8NHG7 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SVIPQ8NHG7 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SVIPQ8NHG7 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SVIPQ8NHG7 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC13.24□□□□□ -0.29
SVIPQ8NHG7 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SVIPQ8NHG7 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
SVIPQ8NHG7 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC13.24□□□□□ -0.29
SVIPQ8NHG7 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SVIPQ8NHG7 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SVIPQ8NHG7 TNXA-203ENST00000507684 2038 ntBASIC13.23□□□□□ -0.29
SVIPQ8NHG7 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
SVIPQ8NHG7 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
SVIPQ8NHG7 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SVIPQ8NHG7 AL118505.1-201ENST00000619370 1932 ntBASIC13.23□□□□□ -0.29
SVIPQ8NHG7 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SVIPQ8NHG7 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SVIPQ8NHG7 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC13.23□□□□□ -0.29
SVIPQ8NHG7 LINC01003-201ENST00000564834 1764 ntBASIC13.23□□□□□ -0.29
SVIPQ8NHG7 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
SVIPQ8NHG7 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SVIPQ8NHG7 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC13.23□□□□□ -0.29
SVIPQ8NHG7 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SVIPQ8NHG7 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SVIPQ8NHG7 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC13.23□□□□□ -0.29
SVIPQ8NHG7 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SVIPQ8NHG7 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SVIPQ8NHG7 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SVIPQ8NHG7 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC13.23□□□□□ -0.29
SVIPQ8NHG7 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SVIPQ8NHG7 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SVIPQ8NHG7 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
SVIPQ8NHG7 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
SVIPQ8NHG7 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SVIPQ8NHG7 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SVIPQ8NHG7 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SVIPQ8NHG7 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC13.23□□□□□ -0.29
SVIPQ8NHG7 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SVIPQ8NHG7 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SVIPQ8NHG7 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
SVIPQ8NHG7 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.22□□□□□ -0.29
SVIPQ8NHG7 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
SVIPQ8NHG7 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SVIPQ8NHG7 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
SVIPQ8NHG7 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC13.22□□□□□ -0.29
SVIPQ8NHG7 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.22□□□□□ -0.29
SVIPQ8NHG7 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
SVIPQ8NHG7 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SVIPQ8NHG7 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
SVIPQ8NHG7 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC13.22□□□□□ -0.29
SVIPQ8NHG7 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SVIPQ8NHG7 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC13.22□□□□□ -0.29
SVIPQ8NHG7 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SVIPQ8NHG7 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
SVIPQ8NHG7 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC13.22□□□□□ -0.29
SVIPQ8NHG7 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms