Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF439Q8NDP4 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF439Q8NDP4 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF439Q8NDP4 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
ZNF439Q8NDP4 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC17.27■□□□□ 0.36
ZNF439Q8NDP4 AF106564.1-201ENST00000607058 2553 ntBASIC17.27■□□□□ 0.36
ZNF439Q8NDP4 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF439Q8NDP4 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
ZNF439Q8NDP4 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
ZNF439Q8NDP4 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
ZNF439Q8NDP4 MTURN-203ENST00000409688 843 ntTSL 2 BASIC17.27■□□□□ 0.36
ZNF439Q8NDP4 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC17.27■□□□□ 0.36
ZNF439Q8NDP4 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC17.27■□□□□ 0.36
ZNF439Q8NDP4 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF439Q8NDP4 CPT2-209ENST00000636935 803 ntTSL 5 BASIC17.27■□□□□ 0.36
ZNF439Q8NDP4 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF439Q8NDP4 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF439Q8NDP4 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC17.27■□□□□ 0.36
ZNF439Q8NDP4 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF439Q8NDP4 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
ZNF439Q8NDP4 PARN-205ENST00000539279 1557 ntTSL 2 BASIC17.27■□□□□ 0.35
ZNF439Q8NDP4 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ZNF439Q8NDP4 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ZNF439Q8NDP4 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ZNF439Q8NDP4 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ZNF439Q8NDP4 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC17.26■□□□□ 0.35
ZNF439Q8NDP4 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF439Q8NDP4 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF439Q8NDP4 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF439Q8NDP4 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF439Q8NDP4 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF439Q8NDP4 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
ZNF439Q8NDP4 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF439Q8NDP4 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF439Q8NDP4 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF439Q8NDP4 NME4-202ENST00000382940 766 ntTSL 3 BASIC17.26■□□□□ 0.35
ZNF439Q8NDP4 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC17.26■□□□□ 0.35
ZNF439Q8NDP4 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF439Q8NDP4 NME4-211ENST00000620944 1193 ntTSL 2 BASIC17.26■□□□□ 0.35
ZNF439Q8NDP4 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF439Q8NDP4 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC17.26■□□□□ 0.35
ZNF439Q8NDP4 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC17.25■□□□□ 0.35
ZNF439Q8NDP4 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.25■□□□□ 0.35
ZNF439Q8NDP4 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF439Q8NDP4 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF439Q8NDP4 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF439Q8NDP4 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF439Q8NDP4 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF439Q8NDP4 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF439Q8NDP4 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF439Q8NDP4 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF439Q8NDP4 STX5-203ENST00000394690 1568 ntTSL 5 BASIC17.25■□□□□ 0.35
ZNF439Q8NDP4 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC17.25■□□□□ 0.35
ZNF439Q8NDP4 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF439Q8NDP4 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF439Q8NDP4 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC17.25■□□□□ 0.35
ZNF439Q8NDP4 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC17.25■□□□□ 0.35
ZNF439Q8NDP4 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.25■□□□□ 0.35
ZNF439Q8NDP4 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF439Q8NDP4 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
ZNF439Q8NDP4 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF439Q8NDP4 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF439Q8NDP4 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF439Q8NDP4 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC17.24■□□□□ 0.35
ZNF439Q8NDP4 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF439Q8NDP4 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
ZNF439Q8NDP4 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF439Q8NDP4 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
ZNF439Q8NDP4 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF439Q8NDP4 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.24■□□□□ 0.35
ZNF439Q8NDP4 AC027612.3-201ENST00000413684 1047 ntBASIC17.24■□□□□ 0.35
ZNF439Q8NDP4 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF439Q8NDP4 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC17.24■□□□□ 0.35
ZNF439Q8NDP4 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC17.24■□□□□ 0.35
ZNF439Q8NDP4 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF439Q8NDP4 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC17.24■□□□□ 0.35
ZNF439Q8NDP4 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF439Q8NDP4 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF439Q8NDP4 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF439Q8NDP4 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF439Q8NDP4 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF439Q8NDP4 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF439Q8NDP4 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC17.23■□□□□ 0.35
ZNF439Q8NDP4 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC17.23■□□□□ 0.35
ZNF439Q8NDP4 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.23■□□□□ 0.35
ZNF439Q8NDP4 MFF-207ENST00000409565 1548 ntTSL 2 BASIC17.23■□□□□ 0.35
ZNF439Q8NDP4 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF439Q8NDP4 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF439Q8NDP4 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.23■□□□□ 0.35
ZNF439Q8NDP4 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC17.23■□□□□ 0.35
ZNF439Q8NDP4 EEF1DP3-203ENST00000566025 782 ntBASIC17.23■□□□□ 0.35
ZNF439Q8NDP4 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF439Q8NDP4 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
ZNF439Q8NDP4 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC17.23■□□□□ 0.35
ZNF439Q8NDP4 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
ZNF439Q8NDP4 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF439Q8NDP4 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF439Q8NDP4 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC17.23■□□□□ 0.35
ZNF439Q8NDP4 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC17.23■□□□□ 0.35
ZNF439Q8NDP4 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms