Protein–RNA interactions for Protein: Q8N187

CARF, Calcium-responsive transcription factor, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CARFQ8N187 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CARFQ8N187 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CARFQ8N187 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CARFQ8N187 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.91■□□□□ 0.78
CARFQ8N187 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CARFQ8N187 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CARFQ8N187 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CARFQ8N187 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.91■□□□□ 0.78
CARFQ8N187 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CARFQ8N187 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CARFQ8N187 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
CARFQ8N187 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CARFQ8N187 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CARFQ8N187 AL117328.2-201ENST00000624617 1940 ntBASIC19.9■□□□□ 0.78
CARFQ8N187 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CARFQ8N187 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CARFQ8N187 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CARFQ8N187 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.9■□□□□ 0.78
CARFQ8N187 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CARFQ8N187 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CARFQ8N187 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.9■□□□□ 0.78
CARFQ8N187 AC007322.3-201ENST00000426526 701 ntBASIC19.9■□□□□ 0.78
CARFQ8N187 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.9■□□□□ 0.78
CARFQ8N187 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.9■□□□□ 0.78
CARFQ8N187 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.9■□□□□ 0.78
CARFQ8N187 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CARFQ8N187 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CARFQ8N187 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
CARFQ8N187 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.9■□□□□ 0.78
CARFQ8N187 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CARFQ8N187 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CARFQ8N187 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CARFQ8N187 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CARFQ8N187 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CARFQ8N187 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CARFQ8N187 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CARFQ8N187 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CARFQ8N187 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CARFQ8N187 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.89■□□□□ 0.77
CARFQ8N187 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.89■□□□□ 0.77
CARFQ8N187 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.89■□□□□ 0.77
CARFQ8N187 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.89■□□□□ 0.77
CARFQ8N187 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.89■□□□□ 0.77
CARFQ8N187 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.88■□□□□ 0.77
CARFQ8N187 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CARFQ8N187 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CARFQ8N187 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.88■□□□□ 0.77
CARFQ8N187 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CARFQ8N187 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CARFQ8N187 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
CARFQ8N187 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CARFQ8N187 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CARFQ8N187 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CARFQ8N187 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CARFQ8N187 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.88■□□□□ 0.77
CARFQ8N187 BX276092.2-201ENST00000417668 665 ntBASIC19.88■□□□□ 0.77
CARFQ8N187 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.88■□□□□ 0.77
CARFQ8N187 KRT18P6-201ENST00000555540 1265 ntBASIC19.88■□□□□ 0.77
CARFQ8N187 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.88■□□□□ 0.77
CARFQ8N187 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CARFQ8N187 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CARFQ8N187 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CARFQ8N187 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CARFQ8N187 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CARFQ8N187 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CARFQ8N187 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.87■□□□□ 0.77
CARFQ8N187 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.87■□□□□ 0.77
CARFQ8N187 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CARFQ8N187 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.87■□□□□ 0.77
CARFQ8N187 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CARFQ8N187 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.87■□□□□ 0.77
CARFQ8N187 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CARFQ8N187 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CARFQ8N187 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.87■□□□□ 0.77
CARFQ8N187 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CARFQ8N187 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CARFQ8N187 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CARFQ8N187 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CARFQ8N187 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CARFQ8N187 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CARFQ8N187 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CARFQ8N187 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CARFQ8N187 MCRIP2P1-201ENST00000394346 511 ntBASIC19.86■□□□□ 0.77
CARFQ8N187 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CARFQ8N187 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CARFQ8N187 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.86■□□□□ 0.77
CARFQ8N187 CD99P1-205ENST00000527459 561 ntBASIC19.86■□□□□ 0.77
CARFQ8N187 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.86■□□□□ 0.77
CARFQ8N187 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.86■□□□□ 0.77
CARFQ8N187 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.86■□□□□ 0.77
CARFQ8N187 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.86■□□□□ 0.77
CARFQ8N187 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CARFQ8N187 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CARFQ8N187 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.86■□□□□ 0.77
CARFQ8N187 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.86■□□□□ 0.77
CARFQ8N187 AC116050.2-201ENST00000612102 1779 ntBASIC19.85■□□□□ 0.77
CARFQ8N187 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CARFQ8N187 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CARFQ8N187 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CARFQ8N187 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms