Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.09■□□□□ 0.49
C11orf88Q6PI97 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
C11orf88Q6PI97 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC18.09■□□□□ 0.49
C11orf88Q6PI97 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.09■□□□□ 0.49
C11orf88Q6PI97 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
C11orf88Q6PI97 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
C11orf88Q6PI97 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
C11orf88Q6PI97 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
C11orf88Q6PI97 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
C11orf88Q6PI97 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
C11orf88Q6PI97 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
C11orf88Q6PI97 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
C11orf88Q6PI97 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
C11orf88Q6PI97 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
C11orf88Q6PI97 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
C11orf88Q6PI97 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.08■□□□□ 0.49
C11orf88Q6PI97 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.08■□□□□ 0.49
C11orf88Q6PI97 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
C11orf88Q6PI97 EDA-201ENST00000338901 1233 ntBASIC18.08■□□□□ 0.48
C11orf88Q6PI97 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
C11orf88Q6PI97 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
C11orf88Q6PI97 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.08■□□□□ 0.48
C11orf88Q6PI97 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
C11orf88Q6PI97 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
C11orf88Q6PI97 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.08■□□□□ 0.48
C11orf88Q6PI97 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
C11orf88Q6PI97 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
C11orf88Q6PI97 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
C11orf88Q6PI97 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
C11orf88Q6PI97 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
C11orf88Q6PI97 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
C11orf88Q6PI97 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.07■□□□□ 0.48
C11orf88Q6PI97 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC18.07■□□□□ 0.48
C11orf88Q6PI97 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC18.07■□□□□ 0.48
C11orf88Q6PI97 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
C11orf88Q6PI97 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
C11orf88Q6PI97 AC135279.3-201ENST00000610945 1311 ntBASIC18.07■□□□□ 0.48
C11orf88Q6PI97 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
C11orf88Q6PI97 UNC93B3-201ENST00000308076 687 ntBASIC18.07■□□□□ 0.48
C11orf88Q6PI97 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
C11orf88Q6PI97 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC18.07■□□□□ 0.48
C11orf88Q6PI97 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
C11orf88Q6PI97 AL136162.1-201ENST00000607711 1078 ntBASIC18.07■□□□□ 0.48
C11orf88Q6PI97 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
C11orf88Q6PI97 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
C11orf88Q6PI97 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
C11orf88Q6PI97 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
C11orf88Q6PI97 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
C11orf88Q6PI97 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
C11orf88Q6PI97 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.06■□□□□ 0.48
C11orf88Q6PI97 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
C11orf88Q6PI97 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
C11orf88Q6PI97 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.06■□□□□ 0.48
C11orf88Q6PI97 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
C11orf88Q6PI97 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
C11orf88Q6PI97 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
C11orf88Q6PI97 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
C11orf88Q6PI97 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.06■□□□□ 0.48
C11orf88Q6PI97 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
C11orf88Q6PI97 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
C11orf88Q6PI97 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
C11orf88Q6PI97 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC18.06■□□□□ 0.48
C11orf88Q6PI97 AC142381.2-201ENST00000566120 298 ntBASIC18.06■□□□□ 0.48
C11orf88Q6PI97 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
C11orf88Q6PI97 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.06■□□□□ 0.48
C11orf88Q6PI97 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
C11orf88Q6PI97 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
C11orf88Q6PI97 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
C11orf88Q6PI97 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
C11orf88Q6PI97 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
C11orf88Q6PI97 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
C11orf88Q6PI97 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
C11orf88Q6PI97 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.05■□□□□ 0.48
C11orf88Q6PI97 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
C11orf88Q6PI97 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
C11orf88Q6PI97 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
C11orf88Q6PI97 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.05■□□□□ 0.48
C11orf88Q6PI97 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
C11orf88Q6PI97 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
C11orf88Q6PI97 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
C11orf88Q6PI97 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
C11orf88Q6PI97 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
C11orf88Q6PI97 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
C11orf88Q6PI97 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
C11orf88Q6PI97 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.04■□□□□ 0.48
C11orf88Q6PI97 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC18.04■□□□□ 0.48
C11orf88Q6PI97 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.04■□□□□ 0.48
C11orf88Q6PI97 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
C11orf88Q6PI97 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.04■□□□□ 0.48
C11orf88Q6PI97 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
C11orf88Q6PI97 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.04■□□□□ 0.48
C11orf88Q6PI97 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
C11orf88Q6PI97 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC18.04■□□□□ 0.48
C11orf88Q6PI97 AL355001.2-201ENST00000620617 1191 ntBASIC18.04■□□□□ 0.48
C11orf88Q6PI97 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
C11orf88Q6PI97 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
C11orf88Q6PI97 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
C11orf88Q6PI97 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
C11orf88Q6PI97 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
C11orf88Q6PI97 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms