Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.27■□□□□ 0.84
SGO1Q5FBB7 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SGO1Q5FBB7 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SGO1Q5FBB7 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SGO1Q5FBB7 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SGO1Q5FBB7 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SGO1Q5FBB7 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SGO1Q5FBB7 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.27■□□□□ 0.84
SGO1Q5FBB7 MIR6084-201ENST00000622012 110 ntBASIC20.27■□□□□ 0.84
SGO1Q5FBB7 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SGO1Q5FBB7 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.27■□□□□ 0.84
SGO1Q5FBB7 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SGO1Q5FBB7 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SGO1Q5FBB7 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SGO1Q5FBB7 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
SGO1Q5FBB7 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SGO1Q5FBB7 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SGO1Q5FBB7 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SGO1Q5FBB7 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SGO1Q5FBB7 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SGO1Q5FBB7 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SGO1Q5FBB7 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SGO1Q5FBB7 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.26■□□□□ 0.83
SGO1Q5FBB7 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
SGO1Q5FBB7 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.26■□□□□ 0.83
SGO1Q5FBB7 AC005837.3-201ENST00000612163 286 ntBASIC20.26■□□□□ 0.83
SGO1Q5FBB7 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SGO1Q5FBB7 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SGO1Q5FBB7 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SGO1Q5FBB7 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SGO1Q5FBB7 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SGO1Q5FBB7 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SGO1Q5FBB7 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.26■□□□□ 0.83
SGO1Q5FBB7 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SGO1Q5FBB7 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SGO1Q5FBB7 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SGO1Q5FBB7 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SGO1Q5FBB7 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.25■□□□□ 0.83
SGO1Q5FBB7 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.25■□□□□ 0.83
SGO1Q5FBB7 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.25■□□□□ 0.83
SGO1Q5FBB7 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.25■□□□□ 0.83
SGO1Q5FBB7 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SGO1Q5FBB7 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
SGO1Q5FBB7 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SGO1Q5FBB7 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.25■□□□□ 0.83
SGO1Q5FBB7 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
SGO1Q5FBB7 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SGO1Q5FBB7 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SGO1Q5FBB7 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
SGO1Q5FBB7 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SGO1Q5FBB7 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SGO1Q5FBB7 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SGO1Q5FBB7 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SGO1Q5FBB7 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SGO1Q5FBB7 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.24■□□□□ 0.83
SGO1Q5FBB7 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
SGO1Q5FBB7 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.24■□□□□ 0.83
SGO1Q5FBB7 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SGO1Q5FBB7 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.24■□□□□ 0.83
SGO1Q5FBB7 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SGO1Q5FBB7 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.24■□□□□ 0.83
SGO1Q5FBB7 AC012414.1-201ENST00000556676 535 ntBASIC20.24■□□□□ 0.83
SGO1Q5FBB7 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.24■□□□□ 0.83
SGO1Q5FBB7 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.24■□□□□ 0.83
SGO1Q5FBB7 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.24■□□□□ 0.83
SGO1Q5FBB7 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
SGO1Q5FBB7 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SGO1Q5FBB7 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SGO1Q5FBB7 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SGO1Q5FBB7 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
SGO1Q5FBB7 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.24■□□□□ 0.83
SGO1Q5FBB7 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.24■□□□□ 0.83
SGO1Q5FBB7 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
SGO1Q5FBB7 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
SGO1Q5FBB7 AL157384.1-201ENST00000445995 2473 ntBASIC20.24■□□□□ 0.83
SGO1Q5FBB7 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SGO1Q5FBB7 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.23■□□□□ 0.83
SGO1Q5FBB7 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.23■□□□□ 0.83
SGO1Q5FBB7 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
SGO1Q5FBB7 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.23■□□□□ 0.83
SGO1Q5FBB7 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SGO1Q5FBB7 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SGO1Q5FBB7 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.23■□□□□ 0.83
SGO1Q5FBB7 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
SGO1Q5FBB7 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SGO1Q5FBB7 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.23■□□□□ 0.83
SGO1Q5FBB7 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SGO1Q5FBB7 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SGO1Q5FBB7 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SGO1Q5FBB7 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SGO1Q5FBB7 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
SGO1Q5FBB7 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SGO1Q5FBB7 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.22■□□□□ 0.83
SGO1Q5FBB7 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SGO1Q5FBB7 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SGO1Q5FBB7 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SGO1Q5FBB7 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SGO1Q5FBB7 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.22■□□□□ 0.83
SGO1Q5FBB7 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SGO1Q5FBB7 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms