Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.89■□□□□ 0.77
CLDN8P56748 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLDN8P56748 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.89■□□□□ 0.77
CLDN8P56748 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.89■□□□□ 0.77
CLDN8P56748 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.89■□□□□ 0.77
CLDN8P56748 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CLDN8P56748 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
CLDN8P56748 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLDN8P56748 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
CLDN8P56748 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.88■□□□□ 0.77
CLDN8P56748 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLDN8P56748 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CLDN8P56748 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLDN8P56748 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLDN8P56748 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLDN8P56748 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLDN8P56748 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.88■□□□□ 0.77
CLDN8P56748 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.88■□□□□ 0.77
CLDN8P56748 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.88■□□□□ 0.77
CLDN8P56748 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CLDN8P56748 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLDN8P56748 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLDN8P56748 GABARAPL3-202ENST00000624044 1851 ntBASIC19.88■□□□□ 0.77
CLDN8P56748 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CLDN8P56748 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLDN8P56748 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLDN8P56748 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLDN8P56748 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLDN8P56748 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.87■□□□□ 0.77
CLDN8P56748 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLDN8P56748 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CLDN8P56748 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.87■□□□□ 0.77
CLDN8P56748 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.87■□□□□ 0.77
CLDN8P56748 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CLDN8P56748 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLDN8P56748 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLDN8P56748 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLDN8P56748 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.87■□□□□ 0.77
CLDN8P56748 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
CLDN8P56748 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.87■□□□□ 0.77
CLDN8P56748 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
CLDN8P56748 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CLDN8P56748 AC091305.1-201ENST00000479476 895 ntBASIC19.87■□□□□ 0.77
CLDN8P56748 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.87■□□□□ 0.77
CLDN8P56748 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.87■□□□□ 0.77
CLDN8P56748 AF213884.3-201ENST00000563833 479 ntBASIC19.87■□□□□ 0.77
CLDN8P56748 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.87■□□□□ 0.77
CLDN8P56748 AC110285.6-201ENST00000617652 491 ntBASIC19.87■□□□□ 0.77
CLDN8P56748 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CLDN8P56748 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CLDN8P56748 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLDN8P56748 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLDN8P56748 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLDN8P56748 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLDN8P56748 AP005212.1-201ENST00000581547 1997 ntBASIC19.86■□□□□ 0.77
CLDN8P56748 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLDN8P56748 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLDN8P56748 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
CLDN8P56748 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLDN8P56748 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLDN8P56748 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLDN8P56748 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.86■□□□□ 0.77
CLDN8P56748 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLDN8P56748 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CLDN8P56748 AC012414.1-201ENST00000556676 535 ntBASIC19.86■□□□□ 0.77
CLDN8P56748 EEF1DP3-203ENST00000566025 782 ntBASIC19.86■□□□□ 0.77
CLDN8P56748 AC053503.5-201ENST00000601508 636 ntBASIC19.86■□□□□ 0.77
CLDN8P56748 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.86■□□□□ 0.77
CLDN8P56748 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLDN8P56748 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CLDN8P56748 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
CLDN8P56748 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.85■□□□□ 0.77
CLDN8P56748 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.85■□□□□ 0.77
CLDN8P56748 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
CLDN8P56748 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLDN8P56748 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLDN8P56748 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.85■□□□□ 0.77
CLDN8P56748 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.85■□□□□ 0.77
CLDN8P56748 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.85■□□□□ 0.77
CLDN8P56748 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.85■□□□□ 0.77
CLDN8P56748 AL031432.3-201ENST00000607698 485 ntBASIC19.85■□□□□ 0.77
CLDN8P56748 AL136967.2-201ENST00000623968 743 ntBASIC19.85■□□□□ 0.77
CLDN8P56748 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.85■□□□□ 0.77
CLDN8P56748 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CLDN8P56748 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLDN8P56748 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLDN8P56748 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.85■□□□□ 0.77
CLDN8P56748 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLDN8P56748 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CLDN8P56748 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CLDN8P56748 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
CLDN8P56748 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLDN8P56748 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLDN8P56748 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.84■□□□□ 0.77
CLDN8P56748 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.84■□□□□ 0.77
CLDN8P56748 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.84■□□□□ 0.77
CLDN8P56748 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.84■□□□□ 0.77
CLDN8P56748 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.84■□□□□ 0.77
CLDN8P56748 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
CLDN8P56748 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms