Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
SLC25A1P53007 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SLC25A1P53007 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.58■□□□□ 0.57
SLC25A1P53007 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.57
SLC25A1P53007 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SLC25A1P53007 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.58■□□□□ 0.57
SLC25A1P53007 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SLC25A1P53007 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SLC25A1P53007 EEF1DP3-203ENST00000566025 782 ntBASIC18.58■□□□□ 0.56
SLC25A1P53007 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.58■□□□□ 0.56
SLC25A1P53007 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.58■□□□□ 0.56
SLC25A1P53007 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SLC25A1P53007 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
SLC25A1P53007 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
SLC25A1P53007 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
SLC25A1P53007 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.58■□□□□ 0.56
SLC25A1P53007 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC25A1P53007 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC25A1P53007 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC25A1P53007 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.57■□□□□ 0.56
SLC25A1P53007 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC25A1P53007 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC25A1P53007 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC25A1P53007 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.57■□□□□ 0.56
SLC25A1P53007 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC25A1P53007 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.57■□□□□ 0.56
SLC25A1P53007 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC18.57■□□□□ 0.56
SLC25A1P53007 MIR939-201ENST00000401314 82 ntBASIC18.57■□□□□ 0.56
SLC25A1P53007 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.57■□□□□ 0.56
SLC25A1P53007 AC053503.5-201ENST00000601508 636 ntBASIC18.57■□□□□ 0.56
SLC25A1P53007 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
SLC25A1P53007 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC25A1P53007 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.57■□□□□ 0.56
SLC25A1P53007 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.57■□□□□ 0.56
SLC25A1P53007 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SLC25A1P53007 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC25A1P53007 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.56■□□□□ 0.56
SLC25A1P53007 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC25A1P53007 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC25A1P53007 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.56■□□□□ 0.56
SLC25A1P53007 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC25A1P53007 AC091305.1-201ENST00000479476 895 ntBASIC18.56■□□□□ 0.56
SLC25A1P53007 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.56■□□□□ 0.56
SLC25A1P53007 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.56■□□□□ 0.56
SLC25A1P53007 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.56■□□□□ 0.56
SLC25A1P53007 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.56■□□□□ 0.56
SLC25A1P53007 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SLC25A1P53007 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.56■□□□□ 0.56
SLC25A1P53007 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SLC25A1P53007 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC25A1P53007 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.56■□□□□ 0.56
SLC25A1P53007 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC25A1P53007 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
SLC25A1P53007 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC25A1P53007 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.55■□□□□ 0.56
SLC25A1P53007 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC25A1P53007 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
SLC25A1P53007 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC25A1P53007 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC25A1P53007 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SLC25A1P53007 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.55■□□□□ 0.56
SLC25A1P53007 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC25A1P53007 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC18.55■□□□□ 0.56
SLC25A1P53007 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SLC25A1P53007 AC012414.1-201ENST00000556676 535 ntBASIC18.55■□□□□ 0.56
SLC25A1P53007 AF213884.3-201ENST00000563833 479 ntBASIC18.55■□□□□ 0.56
SLC25A1P53007 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.55■□□□□ 0.56
SLC25A1P53007 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC25A1P53007 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
SLC25A1P53007 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC25A1P53007 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.55■□□□□ 0.56
SLC25A1P53007 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.55■□□□□ 0.56
SLC25A1P53007 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC25A1P53007 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC25A1P53007 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SLC25A1P53007 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SLC25A1P53007 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC25A1P53007 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
SLC25A1P53007 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC25A1P53007 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC25A1P53007 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC25A1P53007 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC25A1P53007 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.54■□□□□ 0.56
SLC25A1P53007 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.54■□□□□ 0.56
SLC25A1P53007 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC25A1P53007 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
SLC25A1P53007 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SLC25A1P53007 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.54■□□□□ 0.56
SLC25A1P53007 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC25A1P53007 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SLC25A1P53007 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC25A1P53007 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
SLC25A1P53007 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.53■□□□□ 0.56
SLC25A1P53007 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
SLC25A1P53007 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SLC25A1P53007 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SLC25A1P53007 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC25A1P53007 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC25A1P53007 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SLC25A1P53007 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms