Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
LINGO3P0C6S8 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
LINGO3P0C6S8 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LINGO3P0C6S8 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.12■□□□□ 0.81
LINGO3P0C6S8 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
LINGO3P0C6S8 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
LINGO3P0C6S8 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LINGO3P0C6S8 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.11■□□□□ 0.81
LINGO3P0C6S8 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.11■□□□□ 0.81
LINGO3P0C6S8 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
LINGO3P0C6S8 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
LINGO3P0C6S8 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
LINGO3P0C6S8 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.11■□□□□ 0.81
LINGO3P0C6S8 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
LINGO3P0C6S8 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
LINGO3P0C6S8 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LINGO3P0C6S8 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
LINGO3P0C6S8 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LINGO3P0C6S8 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LINGO3P0C6S8 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
LINGO3P0C6S8 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
LINGO3P0C6S8 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.11■□□□□ 0.81
LINGO3P0C6S8 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.11■□□□□ 0.81
LINGO3P0C6S8 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
LINGO3P0C6S8 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LINGO3P0C6S8 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LINGO3P0C6S8 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
LINGO3P0C6S8 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LINGO3P0C6S8 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LINGO3P0C6S8 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
LINGO3P0C6S8 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LINGO3P0C6S8 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.1■□□□□ 0.81
LINGO3P0C6S8 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LINGO3P0C6S8 LINC01960-201ENST00000563759 1884 ntBASIC20.1■□□□□ 0.81
LINGO3P0C6S8 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LINGO3P0C6S8 UNC93B3-201ENST00000308076 687 ntBASIC20.1■□□□□ 0.81
LINGO3P0C6S8 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LINGO3P0C6S8 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LINGO3P0C6S8 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.1■□□□□ 0.81
LINGO3P0C6S8 AC133637.1-201ENST00000624115 1537 ntBASIC20.1■□□□□ 0.81
LINGO3P0C6S8 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LINGO3P0C6S8 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.1■□□□□ 0.81
LINGO3P0C6S8 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LINGO3P0C6S8 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.1■□□□□ 0.81
LINGO3P0C6S8 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LINGO3P0C6S8 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
LINGO3P0C6S8 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LINGO3P0C6S8 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
LINGO3P0C6S8 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LINGO3P0C6S8 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LINGO3P0C6S8 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
LINGO3P0C6S8 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
LINGO3P0C6S8 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
LINGO3P0C6S8 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.09■□□□□ 0.81
LINGO3P0C6S8 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.09■□□□□ 0.81
LINGO3P0C6S8 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LINGO3P0C6S8 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LINGO3P0C6S8 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.09■□□□□ 0.81
LINGO3P0C6S8 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.09■□□□□ 0.81
LINGO3P0C6S8 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
LINGO3P0C6S8 AC011298.3-201ENST00000615796 283 ntBASIC20.09■□□□□ 0.81
LINGO3P0C6S8 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LINGO3P0C6S8 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LINGO3P0C6S8 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
LINGO3P0C6S8 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
LINGO3P0C6S8 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
LINGO3P0C6S8 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
LINGO3P0C6S8 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
LINGO3P0C6S8 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LINGO3P0C6S8 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LINGO3P0C6S8 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
LINGO3P0C6S8 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
LINGO3P0C6S8 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LINGO3P0C6S8 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.08■□□□□ 0.81
LINGO3P0C6S8 AC096631.2-201ENST00000436136 790 ntBASIC20.08■□□□□ 0.81
LINGO3P0C6S8 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.08■□□□□ 0.81
LINGO3P0C6S8 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.08■□□□□ 0.81
LINGO3P0C6S8 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LINGO3P0C6S8 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
LINGO3P0C6S8 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
LINGO3P0C6S8 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.08■□□□□ 0.81
LINGO3P0C6S8 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
LINGO3P0C6S8 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.08■□□□□ 0.8
LINGO3P0C6S8 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
LINGO3P0C6S8 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
LINGO3P0C6S8 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.07■□□□□ 0.8
LINGO3P0C6S8 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
LINGO3P0C6S8 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
LINGO3P0C6S8 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LINGO3P0C6S8 PODN-203ENST00000395871 2744 ntTSL 5 BASIC20.07■□□□□ 0.8
LINGO3P0C6S8 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LINGO3P0C6S8 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LINGO3P0C6S8 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
LINGO3P0C6S8 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
LINGO3P0C6S8 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.07■□□□□ 0.8
LINGO3P0C6S8 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.07■□□□□ 0.8
LINGO3P0C6S8 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.07■□□□□ 0.8
LINGO3P0C6S8 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
LINGO3P0C6S8 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LINGO3P0C6S8 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms