Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.66■□□□□ 0.58
CLDN1O95832 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN1O95832 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.66■□□□□ 0.58
CLDN1O95832 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN1O95832 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC18.66■□□□□ 0.58
CLDN1O95832 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN1O95832 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN1O95832 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN1O95832 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN1O95832 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN1O95832 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC18.65■□□□□ 0.58
CLDN1O95832 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN1O95832 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CLDN1O95832 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC18.65■□□□□ 0.58
CLDN1O95832 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN1O95832 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN1O95832 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
CLDN1O95832 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC18.65■□□□□ 0.58
CLDN1O95832 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN1O95832 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN1O95832 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.65■□□□□ 0.58
CLDN1O95832 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CLDN1O95832 C1QBPP2-201ENST00000528754 825 ntBASIC18.65■□□□□ 0.58
CLDN1O95832 EEF1DP3-203ENST00000566025 782 ntBASIC18.65■□□□□ 0.58
CLDN1O95832 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.65■□□□□ 0.58
CLDN1O95832 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CLDN1O95832 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.65■□□□□ 0.58
CLDN1O95832 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.65■□□□□ 0.58
CLDN1O95832 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN1O95832 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CLDN1O95832 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN1O95832 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN1O95832 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN1O95832 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN1O95832 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
CLDN1O95832 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.64■□□□□ 0.57
CLDN1O95832 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC18.64■□□□□ 0.57
CLDN1O95832 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN1O95832 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN1O95832 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN1O95832 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.64■□□□□ 0.57
CLDN1O95832 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN1O95832 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.64■□□□□ 0.57
CLDN1O95832 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.64■□□□□ 0.57
CLDN1O95832 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.64■□□□□ 0.57
CLDN1O95832 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.64■□□□□ 0.57
CLDN1O95832 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.64■□□□□ 0.57
CLDN1O95832 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC18.64■□□□□ 0.57
CLDN1O95832 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN1O95832 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN1O95832 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC18.63■□□□□ 0.57
CLDN1O95832 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.63■□□□□ 0.57
CLDN1O95832 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN1O95832 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CLDN1O95832 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CLDN1O95832 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN1O95832 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CLDN1O95832 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.63■□□□□ 0.57
CLDN1O95832 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN1O95832 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN1O95832 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN1O95832 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.63■□□□□ 0.57
CLDN1O95832 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN1O95832 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CLDN1O95832 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CLDN1O95832 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CLDN1O95832 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN1O95832 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN1O95832 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN1O95832 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN1O95832 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN1O95832 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CLDN1O95832 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN1O95832 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN1O95832 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC18.62■□□□□ 0.57
CLDN1O95832 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC18.62■□□□□ 0.57
CLDN1O95832 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC18.62■□□□□ 0.57
CLDN1O95832 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CLDN1O95832 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN1O95832 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.62■□□□□ 0.57
CLDN1O95832 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.62■□□□□ 0.57
CLDN1O95832 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.62■□□□□ 0.57
CLDN1O95832 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.62■□□□□ 0.57
CLDN1O95832 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.62■□□□□ 0.57
CLDN1O95832 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.62■□□□□ 0.57
CLDN1O95832 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
CLDN1O95832 CYP2T3P-201ENST00000601990 817 ntBASIC18.62■□□□□ 0.57
CLDN1O95832 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CLDN1O95832 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN1O95832 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN1O95832 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN1O95832 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN1O95832 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CLDN1O95832 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN1O95832 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN1O95832 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN1O95832 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN1O95832 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN1O95832 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN1O95832 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms