Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC22.15■■□□□ 1.14
CLDN5O00501 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC22.15■■□□□ 1.14
CLDN5O00501 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC22.15■■□□□ 1.14
CLDN5O00501 BID-212ENST00000614949 1988 ntTSL 5 BASIC22.15■■□□□ 1.14
CLDN5O00501 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
CLDN5O00501 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CLDN5O00501 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
CLDN5O00501 DYM-203ENST00000442713 2147 ntTSL 2 BASIC22.15■■□□□ 1.14
CLDN5O00501 TUB-203ENST00000534099 1759 ntTSL 2 BASIC22.15■■□□□ 1.14
CLDN5O00501 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC22.15■■□□□ 1.14
CLDN5O00501 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
CLDN5O00501 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.14
CLDN5O00501 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.14
CLDN5O00501 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
CLDN5O00501 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC22.14■■□□□ 1.14
CLDN5O00501 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC22.14■■□□□ 1.14
CLDN5O00501 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CLDN5O00501 MAP2K4P1-201ENST00000438453 1195 ntBASIC22.14■■□□□ 1.13
CLDN5O00501 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CLDN5O00501 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC22.14■■□□□ 1.13
CLDN5O00501 AC005181.1-201ENST00000604782 1256 ntBASIC22.14■■□□□ 1.13
CLDN5O00501 PARP1-210ENST00000629232 477 ntTSL 5 BASIC22.14■■□□□ 1.13
CLDN5O00501 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CLDN5O00501 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CLDN5O00501 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC22.14■■□□□ 1.13
CLDN5O00501 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CLDN5O00501 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
CLDN5O00501 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC22.14■■□□□ 1.13
CLDN5O00501 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
CLDN5O00501 AC079834.2-201ENST00000609776 1949 ntBASIC22.14■■□□□ 1.13
CLDN5O00501 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CLDN5O00501 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC22.13■■□□□ 1.13
CLDN5O00501 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC22.13■■□□□ 1.13
CLDN5O00501 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
CLDN5O00501 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
CLDN5O00501 PLLP-204ENST00000569059 665 ntTSL 3 BASIC22.13■■□□□ 1.13
CLDN5O00501 AC013268.1-206ENST00000638368 961 ntBASIC22.13■■□□□ 1.13
CLDN5O00501 AC112229.1-201ENST00000639295 961 ntBASIC22.13■■□□□ 1.13
CLDN5O00501 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC22.13■■□□□ 1.13
CLDN5O00501 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CLDN5O00501 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC22.13■■□□□ 1.13
CLDN5O00501 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CLDN5O00501 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CLDN5O00501 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC22.12■■□□□ 1.13
CLDN5O00501 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
CLDN5O00501 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
CLDN5O00501 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC22.12■■□□□ 1.13
CLDN5O00501 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CLDN5O00501 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CLDN5O00501 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC22.12■■□□□ 1.13
CLDN5O00501 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CLDN5O00501 WT1-AS_3.1-201ENST00000613262 234 ntBASIC22.12■■□□□ 1.13
CLDN5O00501 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC22.12■■□□□ 1.13
CLDN5O00501 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
CLDN5O00501 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
CLDN5O00501 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CLDN5O00501 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CLDN5O00501 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC22.11■■□□□ 1.13
CLDN5O00501 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CLDN5O00501 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
CLDN5O00501 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
CLDN5O00501 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC22.11■■□□□ 1.13
CLDN5O00501 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC22.11■■□□□ 1.13
CLDN5O00501 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC22.11■■□□□ 1.13
CLDN5O00501 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC22.11■■□□□ 1.13
CLDN5O00501 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CLDN5O00501 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC22.11■■□□□ 1.13
CLDN5O00501 Z98882.1-201ENST00000622160 2253 ntBASIC22.11■■□□□ 1.13
CLDN5O00501 AC068338.2-201ENST00000563278 1430 ntBASIC22.11■■□□□ 1.13
CLDN5O00501 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
CLDN5O00501 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CLDN5O00501 PALM-207ENST00000590161 2137 ntTSL 4 BASIC22.1■■□□□ 1.13
CLDN5O00501 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
CLDN5O00501 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
CLDN5O00501 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
CLDN5O00501 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC22.1■■□□□ 1.13
CLDN5O00501 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CLDN5O00501 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC22.1■■□□□ 1.13
CLDN5O00501 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CLDN5O00501 HLA-L-209ENST00000420110 1011 ntBASIC22.1■■□□□ 1.13
CLDN5O00501 APTR-203ENST00000430801 583 ntTSL 5 BASIC22.1■■□□□ 1.13
CLDN5O00501 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC22.1■■□□□ 1.13
CLDN5O00501 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CLDN5O00501 WWC2-AS2-201ENST00000578387 2183 ntBASIC22.1■■□□□ 1.13
CLDN5O00501 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC22.1■■□□□ 1.13
CLDN5O00501 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC22.1■■□□□ 1.13
CLDN5O00501 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC22.1■■□□□ 1.13
CLDN5O00501 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
CLDN5O00501 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CLDN5O00501 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CLDN5O00501 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
CLDN5O00501 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
CLDN5O00501 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
CLDN5O00501 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CLDN5O00501 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CLDN5O00501 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CLDN5O00501 ID1-201ENST00000376105 1233 ntBASIC22.09■■□□□ 1.13
CLDN5O00501 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CLDN5O00501 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC22.09■■□□□ 1.13
CLDN5O00501 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC22.09■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms