Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV27A0A087WT01 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV27A0A087WT01 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV27A0A087WT01 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV27A0A087WT01 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.93■□□□□ 0.62
TRAV27A0A087WT01 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV27A0A087WT01 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV27A0A087WT01 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV27A0A087WT01 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.93■□□□□ 0.62
TRAV27A0A087WT01 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.93■□□□□ 0.62
TRAV27A0A087WT01 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV27A0A087WT01 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV27A0A087WT01 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.93■□□□□ 0.62
TRAV27A0A087WT01 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.93■□□□□ 0.62
TRAV27A0A087WT01 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV27A0A087WT01 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV27A0A087WT01 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.93■□□□□ 0.62
TRAV27A0A087WT01 AC091305.1-201ENST00000479476 895 ntBASIC18.93■□□□□ 0.62
TRAV27A0A087WT01 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.93■□□□□ 0.62
TRAV27A0A087WT01 AL031432.3-201ENST00000607698 485 ntBASIC18.93■□□□□ 0.62
TRAV27A0A087WT01 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
TRAV27A0A087WT01 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.93■□□□□ 0.62
TRAV27A0A087WT01 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV27A0A087WT01 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV27A0A087WT01 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV27A0A087WT01 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV27A0A087WT01 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.93■□□□□ 0.62
TRAV27A0A087WT01 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV27A0A087WT01 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
TRAV27A0A087WT01 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV27A0A087WT01 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV27A0A087WT01 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
TRAV27A0A087WT01 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV27A0A087WT01 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.92■□□□□ 0.62
TRAV27A0A087WT01 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV27A0A087WT01 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV27A0A087WT01 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.92■□□□□ 0.62
TRAV27A0A087WT01 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV27A0A087WT01 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
TRAV27A0A087WT01 PLK5-205ENST00000642079 1969 ntBASIC18.92■□□□□ 0.62
TRAV27A0A087WT01 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.92■□□□□ 0.62
TRAV27A0A087WT01 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV27A0A087WT01 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV27A0A087WT01 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.92■□□□□ 0.62
TRAV27A0A087WT01 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.92■□□□□ 0.62
TRAV27A0A087WT01 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.92■□□□□ 0.62
TRAV27A0A087WT01 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV27A0A087WT01 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV27A0A087WT01 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
TRAV27A0A087WT01 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV27A0A087WT01 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.92■□□□□ 0.62
TRAV27A0A087WT01 LINC01521-201ENST00000504184 1943 ntBASIC18.92■□□□□ 0.62
TRAV27A0A087WT01 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.92■□□□□ 0.62
TRAV27A0A087WT01 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV27A0A087WT01 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV27A0A087WT01 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.91■□□□□ 0.62
TRAV27A0A087WT01 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV27A0A087WT01 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV27A0A087WT01 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.91■□□□□ 0.62
TRAV27A0A087WT01 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.91■□□□□ 0.62
TRAV27A0A087WT01 AL136967.2-201ENST00000623968 743 ntBASIC18.91■□□□□ 0.62
TRAV27A0A087WT01 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
TRAV27A0A087WT01 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV27A0A087WT01 FEM1AP1-201ENST00000431297 1995 ntBASIC18.91■□□□□ 0.62
TRAV27A0A087WT01 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
TRAV27A0A087WT01 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV27A0A087WT01 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV27A0A087WT01 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.91■□□□□ 0.62
TRAV27A0A087WT01 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV27A0A087WT01 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.9■□□□□ 0.62
TRAV27A0A087WT01 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.9■□□□□ 0.62
TRAV27A0A087WT01 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV27A0A087WT01 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV27A0A087WT01 AC006128.1-201ENST00000624704 1661 ntBASIC18.9■□□□□ 0.62
TRAV27A0A087WT01 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV27A0A087WT01 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.9■□□□□ 0.62
TRAV27A0A087WT01 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
TRAV27A0A087WT01 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV27A0A087WT01 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV27A0A087WT01 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV27A0A087WT01 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
TRAV27A0A087WT01 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV27A0A087WT01 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
TRAV27A0A087WT01 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV27A0A087WT01 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV27A0A087WT01 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.89■□□□□ 0.62
TRAV27A0A087WT01 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRAV27A0A087WT01 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.89■□□□□ 0.61
TRAV27A0A087WT01 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRAV27A0A087WT01 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.89■□□□□ 0.61
TRAV27A0A087WT01 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.89■□□□□ 0.61
TRAV27A0A087WT01 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRAV27A0A087WT01 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRAV27A0A087WT01 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
TRAV27A0A087WT01 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV27A0A087WT01 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV27A0A087WT01 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.88■□□□□ 0.61
TRAV27A0A087WT01 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV27A0A087WT01 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV27A0A087WT01 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms