Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.74■□□□□ 0.75
GPC6Q9Y625 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
GPC6Q9Y625 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
GPC6Q9Y625 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.74■□□□□ 0.75
GPC6Q9Y625 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.74■□□□□ 0.75
GPC6Q9Y625 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
GPC6Q9Y625 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
GPC6Q9Y625 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.73■□□□□ 0.75
GPC6Q9Y625 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.73■□□□□ 0.75
GPC6Q9Y625 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
GPC6Q9Y625 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.73■□□□□ 0.75
GPC6Q9Y625 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
GPC6Q9Y625 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
GPC6Q9Y625 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
GPC6Q9Y625 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
GPC6Q9Y625 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.73■□□□□ 0.75
GPC6Q9Y625 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.73■□□□□ 0.75
GPC6Q9Y625 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
GPC6Q9Y625 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
GPC6Q9Y625 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.73■□□□□ 0.75
GPC6Q9Y625 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
GPC6Q9Y625 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
GPC6Q9Y625 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
GPC6Q9Y625 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
GPC6Q9Y625 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
GPC6Q9Y625 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
GPC6Q9Y625 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
GPC6Q9Y625 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
GPC6Q9Y625 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
GPC6Q9Y625 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.72■□□□□ 0.75
GPC6Q9Y625 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
GPC6Q9Y625 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
GPC6Q9Y625 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
GPC6Q9Y625 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
GPC6Q9Y625 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.72■□□□□ 0.75
GPC6Q9Y625 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
GPC6Q9Y625 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
GPC6Q9Y625 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
GPC6Q9Y625 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
GPC6Q9Y625 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
GPC6Q9Y625 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
GPC6Q9Y625 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GPC6Q9Y625 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GPC6Q9Y625 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GPC6Q9Y625 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GPC6Q9Y625 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.71■□□□□ 0.75
GPC6Q9Y625 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GPC6Q9Y625 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.71■□□□□ 0.75
GPC6Q9Y625 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GPC6Q9Y625 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
GPC6Q9Y625 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
GPC6Q9Y625 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
GPC6Q9Y625 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GPC6Q9Y625 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GPC6Q9Y625 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
GPC6Q9Y625 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
GPC6Q9Y625 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.7■□□□□ 0.74
GPC6Q9Y625 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GPC6Q9Y625 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GPC6Q9Y625 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GPC6Q9Y625 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GPC6Q9Y625 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GPC6Q9Y625 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.7■□□□□ 0.74
GPC6Q9Y625 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
GPC6Q9Y625 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.7■□□□□ 0.74
GPC6Q9Y625 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.7■□□□□ 0.74
GPC6Q9Y625 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.7■□□□□ 0.74
GPC6Q9Y625 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
GPC6Q9Y625 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GPC6Q9Y625 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
GPC6Q9Y625 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
GPC6Q9Y625 AP006587.3-201ENST00000525742 1516 ntBASIC19.7■□□□□ 0.74
GPC6Q9Y625 TSPY26P-201ENST00000476365 1326 ntBASIC19.7■□□□□ 0.74
GPC6Q9Y625 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GPC6Q9Y625 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
GPC6Q9Y625 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
GPC6Q9Y625 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.7■□□□□ 0.74
GPC6Q9Y625 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
GPC6Q9Y625 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
GPC6Q9Y625 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
GPC6Q9Y625 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
GPC6Q9Y625 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.69■□□□□ 0.74
GPC6Q9Y625 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
GPC6Q9Y625 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GPC6Q9Y625 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GPC6Q9Y625 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.69■□□□□ 0.74
GPC6Q9Y625 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GPC6Q9Y625 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.69■□□□□ 0.74
GPC6Q9Y625 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.69■□□□□ 0.74
GPC6Q9Y625 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.69■□□□□ 0.74
GPC6Q9Y625 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.69■□□□□ 0.74
GPC6Q9Y625 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.69■□□□□ 0.74
GPC6Q9Y625 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.69■□□□□ 0.74
GPC6Q9Y625 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GPC6Q9Y625 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
GPC6Q9Y625 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
GPC6Q9Y625 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GPC6Q9Y625 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.69■□□□□ 0.74
GPC6Q9Y625 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.69■□□□□ 0.74
GPC6Q9Y625 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms