Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.3■□□□□ 0.84
PCDHGA11Q9Y5H2 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.3■□□□□ 0.84
PCDHGA11Q9Y5H2 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
PCDHGA11Q9Y5H2 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGA11Q9Y5H2 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGA11Q9Y5H2 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGA11Q9Y5H2 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGA11Q9Y5H2 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.3■□□□□ 0.84
PCDHGA11Q9Y5H2 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGA11Q9Y5H2 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.3■□□□□ 0.84
PCDHGA11Q9Y5H2 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.3■□□□□ 0.84
PCDHGA11Q9Y5H2 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
PCDHGA11Q9Y5H2 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGA11Q9Y5H2 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGA11Q9Y5H2 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGA11Q9Y5H2 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.29■□□□□ 0.84
PCDHGA11Q9Y5H2 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGA11Q9Y5H2 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGA11Q9Y5H2 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGA11Q9Y5H2 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGA11Q9Y5H2 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
PCDHGA11Q9Y5H2 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
PCDHGA11Q9Y5H2 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.29■□□□□ 0.84
PCDHGA11Q9Y5H2 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.29■□□□□ 0.84
PCDHGA11Q9Y5H2 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
PCDHGA11Q9Y5H2 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGA11Q9Y5H2 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.29■□□□□ 0.84
PCDHGA11Q9Y5H2 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGA11Q9Y5H2 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGA11Q9Y5H2 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGA11Q9Y5H2 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGA11Q9Y5H2 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGA11Q9Y5H2 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGA11Q9Y5H2 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGA11Q9Y5H2 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGA11Q9Y5H2 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
PCDHGA11Q9Y5H2 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.28■□□□□ 0.84
PCDHGA11Q9Y5H2 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGA11Q9Y5H2 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGA11Q9Y5H2 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGA11Q9Y5H2 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGA11Q9Y5H2 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGA11Q9Y5H2 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGA11Q9Y5H2 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGA11Q9Y5H2 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGA11Q9Y5H2 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGA11Q9Y5H2 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGA11Q9Y5H2 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGA11Q9Y5H2 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
PCDHGA11Q9Y5H2 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.27■□□□□ 0.84
PCDHGA11Q9Y5H2 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.27■□□□□ 0.84
PCDHGA11Q9Y5H2 MIR6084-201ENST00000622012 110 ntBASIC20.27■□□□□ 0.84
PCDHGA11Q9Y5H2 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGA11Q9Y5H2 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGA11Q9Y5H2 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
PCDHGA11Q9Y5H2 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
PCDHGA11Q9Y5H2 AF106564.1-201ENST00000607058 2553 ntBASIC20.27■□□□□ 0.83
PCDHGA11Q9Y5H2 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PCDHGA11Q9Y5H2 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
PCDHGA11Q9Y5H2 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
PCDHGA11Q9Y5H2 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
PCDHGA11Q9Y5H2 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.26■□□□□ 0.83
PCDHGA11Q9Y5H2 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHGA11Q9Y5H2 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHGA11Q9Y5H2 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
PCDHGA11Q9Y5H2 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHGA11Q9Y5H2 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHGA11Q9Y5H2 AC027612.3-201ENST00000413684 1047 ntBASIC20.26■□□□□ 0.83
PCDHGA11Q9Y5H2 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHGA11Q9Y5H2 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHGA11Q9Y5H2 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.26■□□□□ 0.83
PCDHGA11Q9Y5H2 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHGA11Q9Y5H2 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
PCDHGA11Q9Y5H2 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.26■□□□□ 0.83
PCDHGA11Q9Y5H2 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHGA11Q9Y5H2 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.26■□□□□ 0.83
PCDHGA11Q9Y5H2 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHGA11Q9Y5H2 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHGA11Q9Y5H2 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHGA11Q9Y5H2 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHGA11Q9Y5H2 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHGA11Q9Y5H2 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.25■□□□□ 0.83
PCDHGA11Q9Y5H2 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.25■□□□□ 0.83
PCDHGA11Q9Y5H2 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHGA11Q9Y5H2 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.25■□□□□ 0.83
PCDHGA11Q9Y5H2 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHGA11Q9Y5H2 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHGA11Q9Y5H2 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
PCDHGA11Q9Y5H2 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.25■□□□□ 0.83
PCDHGA11Q9Y5H2 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.25■□□□□ 0.83
PCDHGA11Q9Y5H2 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHGA11Q9Y5H2 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHGA11Q9Y5H2 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHGA11Q9Y5H2 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
PCDHGA11Q9Y5H2 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
PCDHGA11Q9Y5H2 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.24■□□□□ 0.83
PCDHGA11Q9Y5H2 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
PCDHGA11Q9Y5H2 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHGA11Q9Y5H2 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.24■□□□□ 0.83
PCDHGA11Q9Y5H2 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms